| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 630 (0.900) | 60 (0.100) | 16/98 | NT | 9.3% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 624 (1.020) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 836 total aligned reads displayed.
ATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTTGTGC > CP009273/410221‑410354 | aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATg < 1:6512010/68‑1 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:46326810‑M2/1‑66 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:57268635‑M2/1‑66 (MQ=255) gcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagc > 1:28548263‑M2/1‑60 (MQ=255) gcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagc > 1:35824712‑M2/1‑60 (MQ=255) gcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTACTGGCGAATATGcgccagc < 1:23886369‑M2/67‑8 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGTGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:50677969/68‑1 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:39387109/68‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:17586737/67‑1 (MQ=255) gcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCgcgc < 1:11181253/67‑1 (MQ=255) cATTGTGCTCTGTAAGCTAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:56262059/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCACGCTGCTGGCGAATATGCGCCTGCGCCGCGCtgt < 1:17119323/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:49070006/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:21482211/68‑1 (MQ=255) cATTGCGCTCTGTACGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:32673554/68‑1 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:33003466/1‑68 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:50266856/1‑68 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:38832091/1‑68 (MQ=255) aTTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgtg > 1:27267883/1‑68 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:33454203/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:54097693/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:13110297/68‑1 (MQ=255) ttGTGCGCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:12166876/68‑1 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:27684150/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:30471246/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:47318298/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:45441164/1‑67 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGc < 1:3502698/67‑1 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:1013385/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:36239503/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:44306591/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:9023965/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:43144124/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCAGCGCTGTGTTCTGCg > 1:4073526/1‑68 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:48830798/1‑65 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:12927157/1‑67 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:33821441/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:42028980‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:7204690‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:55127093‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:55540294/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:51316522/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:2671742/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:44543694/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:36610388/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:49790991/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:37737355/68‑1 (MQ=255) aGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGt > 1:42693211/1‑68 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGATTATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:57988860/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:41818401/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:9337341/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:39683266/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:41133163/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:52802559/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:10477215/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:22481950/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:23486961/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:1943685/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGAGtt > 1:2969831/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTATGCGATGCGtt > 1:2521332/1‑67 (MQ=255) gAGTTTTTACTTCTTCAATCTGCTGGCGAATATGCGCCTGCGCCGCGGGGTGTTCTGCGATGCGtt < 1:51787140/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttac > 1:56701802‑M2/1‑34 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:1169575/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:16688849/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTc < 1:38256133/67‑1 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:6162493/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:21113685/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:37006053/1‑68 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:8351726/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:24488597/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:26332873/68‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt < 1:48532066/68‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAg < 1:28929088/67‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGCCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:31866020‑M2/1‑30 (MQ=255) tttACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagc > 1:40218049‑M2/1‑29 (MQ=255) tttACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgtg < 1:1510611/68‑1 (MQ=255) tatacTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagc > 1:18995505‑M2/3‑29 (MQ=255) tACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg < 1:14078887/68‑1 (MQ=255) tACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg < 1:16035683/68‑1 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:19994807/1‑68 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:34229251/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:22113090/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:7784074/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGa < 1:20479600/68‑1 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGa < 1:28214652/68‑1 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg < 1:25714069/68‑1 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg < 1:53617150/68‑1 (MQ=255) aaTCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAt < 1:4474713/68‑1 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:52241624/1‑67 (MQ=255) ctgctgGCGAATGTGCGCCAGCGCCGCGCTGTGTTCTGCGGTGCGTTCCCAGTGTGGACGAAGATTTc > 1:54381300/1‑68 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:53314210/67‑1 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:31432659/67‑1 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:47798112/67‑1 (MQ=255) aaTATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGtt > 1:17943500/1‑68 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:54643122/68‑1 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:18364093/68‑1 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:13652875/68‑1 (MQ=255) tatGCGCCAGCGCCGCGCTGTGTGCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt < 1:20892604/68‑1 (MQ=255) atGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt > 1:43611202/1‑67 (MQ=255) atGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTtgt > 1:45811777/1‑67 (MQ=255) | ATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGGTTGTGC > CP009273/410221‑410354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |