| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 410282 | 630 (0.900) | 60 (0.100) | 16/98 | NT | 9.3% | coding (928/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| ? | CP009273 | = 410288 | 624 (1.020) | coding (922/3147 nt) | sbcC | exonuclease, dsDNA, ATP‑dependent | |||||
Only 100 of 914 total aligned reads displayed.
GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 | cGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAat > 1:10107599/1‑68 (MQ=255) cGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAat > 1:14093420/1‑68 (MQ=255) cGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAat > 1:5155013/1‑68 (MQ=255) aTGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAatat > 1:37937617/1‑67 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:32875929‑M2/1‑66 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcg > 1:21470762‑M2/1‑66 (MQ=255) gCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGc < 1:24513056‑M2/67‑2 (MQ=255) gcgAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagc > 1:41866288‑M2/1‑60 (MQ=255) gAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAgcgc < 1:34981916/67‑1 (MQ=255) aGCTCCATTGTGGGCTGTAAGCGAGTATTTACTTCTTCATTCTGGTGGCGAATATGCGCCAGcgccgc < 1:17974083/68‑1 (MQ=255) aGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc < 1:44249730/68‑1 (MQ=255) cgcCATTGTGCTCTGTAAGCGCGTATTTACTTCTTCAATCTGCTGGGGgattttcgcgagcagattgg > 1:56972100‑M1/1‑48 (MQ=255) cgcCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGcgccgc > 1:23504407/1‑66 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:47131383/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:28508547/68‑1 (MQ=255) cATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:56406481/68‑1 (MQ=255) cATTGCGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCtgt < 1:6573018/68‑1 (MQ=255) aTTGTGCTCTG‑AAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:35779343/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:57444376/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:11383259/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:29456159/68‑1 (MQ=255) ttGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt < 1:28827010/68‑1 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagt > 1:43668201‑M1/1‑42 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:40072998/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:5429970/1‑67 (MQ=255) tgtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTgtgt > 1:27684150/1‑67 (MQ=255) gtgCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGCCGAATATGcgccagcagattgaagaag > 1:13495494‑M2/1‑47 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaa > 1:10447592‑M2/1‑45 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt < 1:54598613/67‑1 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:23934452/1‑67 (MQ=255) gCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCt > 1:39098131/1‑67 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGgatattcgccagcagattgaagaagtaaat > 1:34063580‑M1/1‑37 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:47526264/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:779627/1‑68 (MQ=255) tctGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCg > 1:3178018/1‑68 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGAt > 1:43023758/1‑67 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:18714794/68‑1 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:37606046/68‑1 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATg < 1:33089827/68‑1 (MQ=255) gTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCAGCGCTGTGTTCTGCGATg < 1:52071197/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:7204690‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:42028980‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcg > 1:36692163‑M2/1‑38 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg < 1:2671742/68‑1 (MQ=255) aaGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCg > 1:48931284/1‑68 (MQ=255) aGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGt > 1:42693211/1‑68 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgctt > 1:50976502‑M1/1‑29 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgctt > 1:50485488‑M1/1‑29 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGcatattcgccagcagattgaagaagtaaatactcgctt > 1:9045494‑M1/1‑29 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGATTATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:57988860/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:50082027/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:1943685/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:45219315/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:44864569/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt > 1:1706479/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTATGCGATGCGtt > 1:4566776/1‑67 (MQ=255) cGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTATGCGATGCGtt > 1:2521332/1‑67 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:35993006/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:53422096/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:52564025/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:16688849/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:3957683/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:20989657/66‑1 (MQ=255) gAGTATTTACTTCTTCAATCTGCTAGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:33702010/66‑1 (MQ=255) gAGTATTTACTTCTTCAAGCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGtt < 1:30205546/66‑1 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:5382838/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:46273941/1‑68 (MQ=255) aGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTccc > 1:53017042/1‑68 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacaga > 1:48265224‑M2/1‑30 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:55727785/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCa < 1:8351726/66‑1 (MQ=255) aTTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgt > 1:17577976/1‑68 (MQ=255) tttACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgtg < 1:1510611/68‑1 (MQ=255) ttACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAgtgt > 1:32407019/1‑68 (MQ=255) taattcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGtgtg < 1:1084629/65‑1 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:6260279/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:25803407/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:26349334/1‑68 (MQ=255) aCTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg < 1:54891304/68‑1 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:22113090/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:27272409/1‑67 (MQ=255) cttcttCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTgg > 1:48630113/1‑67 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:228732/1‑68 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:38468377/1‑68 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:125191/1‑68 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:55228510/1‑68 (MQ=255) tcttcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACg > 1:41368187/1‑68 (MQ=255) tcAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAg > 1:15892360/1‑68 (MQ=255) ccaATCTGCGGGCGAATATGcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcg > 1:40624690‑M2/2‑20 (MQ=255) tCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGAtt > 1:13081855/1‑67 (MQ=255) ctgctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTc > 1:31209492/1‑68 (MQ=255) ctgctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTc > 1:20499868/1‑68 (MQ=255) tgctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgc > 1:49578025‑M1/1‑8 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcg < 1:11794359‑M1/68‑62 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgc < 1:44540684‑M1/67‑61 (MQ=255) gctgGCGcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgc < 1:40885841‑M1/67‑61 (MQ=255) gctgGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGt > 1:20007122/1‑68 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:36376649‑M1/1‑2 (MQ=255) cgcatattcgccagcagattgaagaagtaaatactcgcttacagagcacaatggcgcttcgcgcgagc > 1:9339000‑M1/1‑2 (MQ=255) gAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCgg < 1:28073105/67‑1 (MQ=255) | GGCGAATGCTCGCGCGAAGCGCCATTGTGCTCTGTAAGCGAGTATTTACTTCTTCAATCTGCTGGCGAATATGCGCCAGCGCCGCGCTGTGTTCTGCGATGCGTTCCCAGTGTGGACGAAGATTTCGTGCCGG > CP009273/410216‑410348 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |