| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1238033 = | 901 (1.290) | 38 (0.080) | 16/76 | NT | 7.1% | coding (504/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A |
| ? | CP009273 | 1238051 = | 386 (0.810) | coding (486/915 nt) | ldcA | murein tetrapeptide carboxypeptidase; LD‑carboxypeptidase A | |||||
Only 100 of 247 total aligned reads displayed.
TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238116‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:1195901/68‑1TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGG < 1:7589830/68‑1TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAG > 1:34144012/1‑67 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:3938011/68‑1 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:26863065/68‑1 TTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGC < 1:16950517/68‑1 TACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCC < 1:29716681/68‑1 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:35674538/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:11362752/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:12887677/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC > 1:20561110/1‑68 ACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC < 1:27823380/68‑1 ACCGAGCACCATTTCTGGCAGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCC < 1:47320806/68‑1 CCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGGAGGCCg > 1:13854283/1‑66 CGAGCACCATTTCTGGCTGGCGTTTCGCAATGAAACCTTCACCATTGAATGGCAAGGGGGGGGCCCG > 1:9022928/1‑67 CGAGCACCATTTCTGGCTGGCGTTTCGCAATGAAACCGTCACCATTGAATGGCAAGGGGGAGGCCCG > 1:50261296/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCag > 1:43144170/1‑65 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:48704240/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:2806204/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:44874140/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:32607692/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:23631530/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:38838233/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:11621689/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:56625104/1‑67 CGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCG > 1:18076557/1‑67 ACCATTTCTGGCTGGCGTTAGGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:52590287/66‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:34735379/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:43991691/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:56051204/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGT < 1:28565709/68‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATG > 1:21765261/1‑67 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:9418685/66‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:35413221/66‑1 ACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACAT < 1:6877907/66‑1 TTCTGGCTGGCGTTACGCCATGAAACCTTCACCATCGAATGGCAAGGGGAAGGCCCGACATGTCGGGC < 1:56488074/68‑1 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGC < 1:28317904/68‑1 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGC < 1:54090328/68‑1 TTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGC < 1:37229396/68‑1 TCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGCCATGTCGGGCC > 1:54705798/1‑68 CTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCC < 1:20344193/67‑1 CTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCC < 1:14781692/67‑1 CGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGGCGGGCCTTCCCCTT < 1:18323475/67‑1 TACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCC < 1:57589780/67‑1 ACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCAT < 1:49229641/68‑1 GAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGG < 1:42004704/68‑1 GAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGG < 1:25643874/68‑1 GAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGG < 1:49982160/68‑1 ACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGGCATTCAATGGTGA > 1:38658877/1‑68 CTTCACCATTGAATGGAAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTGAATGGTGAAG > 1:6189543/1‑68 TCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGT < 1:51024677/68‑1 CATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCA > 1:5150142/1‑68 TGAATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATT > 1:2298888/1‑67 ATGGCAAGGGGAAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGT > 1:7916954/1‑68 AAGGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCA > 1:46244195/1‑68 GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA < 1:15557212/68‑1 GGCCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGA < 1:24652803/68‑1 CCCGACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAA > 1:33802465/1‑68 cccTGTCGGGCCTTCCCCTTGCCATTCAAGGGTTAAGGTTTCATGGCGTAACGCCAGCCAGAAATGGT < 1:32483156/65‑1 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:4724085/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:47636443/1‑68 ACATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:16249524/1‑68 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGCAATGGT > 1:31040628/1‑67 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:41117585/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:4568672/1‑67 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT < 1:590113/67‑1 CATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:24223074/1‑67 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:4244033/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:53468669/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:51886782/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC > 1:55886265/1‑68 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC < 1:23245490/68‑1 ATGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGT > 1:28665007/1‑66 TGTCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGC > 1:38182658/1‑67 TCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:13559263/68‑1 TCGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG > 1:39642232/1‑68 cgcGCCTTCCCCTTGCCATGCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:18460092/64‑1 cgcGCCTCCCCCTGGCCATTAAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:43705839/64‑1 CGGGCCTTCCCCTTGCGATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:6688307/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGG > 1:55599241/1‑68 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:30790956/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:7224906/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:7968183/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:21183149/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:33831508/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:3919747/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:14141162/67‑1 CGGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:37464748/67‑1 CGGGCCGCCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCG < 1:10003844/67‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:21335590/68‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT > 1:50896155/1‑68 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:45521049/68‑1 GGGCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGT < 1:11102442/68‑1 ggtCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCCGTA > 1:56420493/4‑68 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:55026883/1‑68 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:39710541/1‑68 GCCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAA > 1:10657824/1‑68 CCTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAA > 1:32132192/1‑68 CTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > 1:52666605/1‑68 CTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > 1:13428336/1‑68 TTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAAGGGGAAGGCCCGACATGTCGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1238116‑1238033‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgacatgtcgggccTTCCCCTTGCCATTCAATGGTGAAGGTTTCATTGCGTAACGCCAGCCAGAAATGGTGCTCGGTAAAG > CP009273/1238051‑1238117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |