| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1586885 = | NA (NA) | 8 (0.010) | 6/90 | NT | NA | intergenic (‑186/+37) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| ? | CP009273 | 1586916 = | NA (NA) | intergenic (‑217/+6) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog | |||||
Only 100 of 393 total aligned reads displayed.
GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1586962‑1586885‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcggcttaTACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT > CP009273/1586916‑1586982 GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:7566544/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:2079917/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:56993039/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:40058192/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:38094075/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:41751894/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:26206012/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:27852644/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:13749427/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:12178095/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:35420743/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:5072855/1‑68GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC > 1:43995226/1‑68 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATACGCCGCATGTCGAGATGGCAT > 1:28821546/1‑68 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCAT > 1:43099192/1‑68 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCAT > 1:24771964/1‑68 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC < 1:15126077/66‑1 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC < 1:14097484/66‑1 GATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGC < 1:17610581/66‑1 ACTCCGGGCAAGCTGGGAGTGAAATATAGCAGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:1907444/68‑1 ACTCAGGGCATGCTGGGAGTGAATTATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:31417664/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:3605467/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:49736674/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:30971787/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:33112513/68‑1 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:33637423/68‑1 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:35603690/68‑1 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:48042658/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:45513672/68‑1 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:9537109/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:12574230/1‑68 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:17908177/68‑1 ACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:40536363/68‑1 ACTCAGGGCATGCTGGGAGTGAAAAATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG < 1:25439534/68‑1 CTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGG < 1:29204289/68‑1 CTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGG < 1:7914310/68‑1 CTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:9064186/1‑67 CTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:38577020/1‑67 tctGGGCATGCTGTTAGTGAAATAAAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:30438695/65‑1 tccGGGCATGCTGGGAGTGAAATATAGCTGGTACACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:7059956/65‑1 tccGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:51491338/65‑1 gCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:46838754/67‑1 TCATGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:10811665/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTCTAAGCCGCATGTCGAGATGGCATGCGGC < 1:15445874/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:36740709/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:38338288/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:46394331/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:41315252/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:44590052/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:39101875/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:27425270/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:50395291/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:2971995/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:10292157/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:12977134/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:13395520/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:52677594/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:16538762/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:5777667/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:18777449/68‑1 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:54558016/1‑66 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:15868234/1‑66 TCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:39397374/1‑66 TCAGGGCATGCTGGGAGGGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGC < 1:3403148/68‑1 TCAGGGCATGCTGGGAGCGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCG > 1:11108421/1‑66 GGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTA > 1:54858375/1‑68 GCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTA < 1:51873196/66‑1 GCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTA < 1:37611328/66‑1 GAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTATACGGTTTACCAGC < 1:55456352/67‑1 AATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTATACGGTTTACCAGCTAT < 1:2191142/68‑1 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTT > 1:6307996/1‑68 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTT > 1:45785919/1‑68 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTT < 1:9674991/68‑1 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTT > 1:44283029/1‑68 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTT > 1:25173629/1‑68 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTT < 1:1687160/67‑1 CATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGT < 1:40834836/53‑1 ATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTA > 1:18330401/1‑68 TGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTA > 1:14471772/1‑67 TGCGGCTTATACGGTTTACCAGCTAAATTTCACTCCCAGCATGCCCTGAGTAGCGCTATAGCCTTTA > 1:49363810/1‑67 GCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATC < 1:19922386/68‑1 GCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATC < 1:21302111/68‑1 GCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATC < 1:229675/68‑1 GCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATC < 1:54162920/68‑1 GGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCAC < 1:10026052/68‑1 GGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCAC < 1:10482274/68‑1 GGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCAC < 1:53249436/68‑1 GGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCAC < 1:32173724/68‑1 GCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCA > 1:14758395/1‑66 GCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCA > 1:11719617/1‑66 CTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACC < 1:16045994/67‑1 CTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACC < 1:42959096/67‑1 CTTATACGGTTCACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTACCACC < 1:56216977/67‑1 TTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTA < 1:23750901/68‑1 TTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTA < 1:25677254/68‑1 TTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTA < 1:31819123/68‑1 ATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT < 1:34498286/68‑1 ATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT < 1:34931303/68‑1 ATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT < 1:48369640/68‑1 ATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT < 1:43516843/68‑1 GCGATACTCAGGGCATGCTGGGAGTGAAATATAGCTGGTAAACCGTATAAGCCGCATGTCGAGATGGCATGCGGCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1586962‑1586885‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgcggcttaTACGGTTTACCAGCTATATTTCACTCCCAGCATGCCCTGAGTATCGCTATAGCCTTTATCACCTAGT > CP009273/1586916‑1586982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |