| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1586885 = | NA (NA) | 8 (0.010) | 6/90 | NT | NA | intergenic (‑186/+37) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog |
| ? | CP009273 | 1586916 = | NA (NA) | intergenic (‑217/+6) | hipB/yneO | antitoxin of HipAB toxin‑antitoxin system/pseudogene, AidA homolog | |||||
Only 100 of 855 total aligned reads displayed.
CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586819‑1586952 | ccgcgatcgcggataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa > 1:28619410‑M2/16‑68 (MQ=255)ccgcgatcgcggataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa > 1:44260644‑M2/16‑68 (MQ=255)ccgcgatcgcggataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa > 1:49576903‑M2/16‑68 (MQ=255)CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa < 1:18912454‑M1/68‑1 (MQ=255)CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTa < 1:55455444‑M1/68‑1 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:3738923‑M1/3‑1 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:17125725‑M1/3‑1 (MQ=255) taggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTaa < 1:15555166‑M1/3‑1 (MQ=255) ggtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAg < 1:52764357‑M1/4‑1 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:25278691‑M1/6‑1 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:10026052‑M1/6‑1 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:53249436‑M1/6‑1 (MQ=255) gtgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGcc < 1:10655265‑M1/6‑1 (MQ=255) tgataaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGc > 1:1490032‑M1/62‑66 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:47624137‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:43535837‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:18512955‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:43217445‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:37958563‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:7901941‑M1/67‑1 (MQ=255) ATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGcc < 1:11416652‑M1/67‑1 (MQ=255) taaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCa > 1:14471772‑M1/59‑67 (MQ=255) taaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCa > 1:12342131‑M1/59‑67 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:41367575‑M1/58‑68 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:26086991‑M1/58‑68 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:27772106‑M1/58‑68 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:38370587‑M1/11‑1 (MQ=255) aaaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg > 1:56695822‑M1/58‑68 (MQ=255) aaggctatagcgatactcagggcatgctgggagtgaaatatagctggtaaaccgtaTAAGCCGCATg < 1:35629202‑M1/11‑1 (MQ=255) ataAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGcc < 1:42625529‑M2/64‑1 (MQ=255) taAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa < 1:23425785‑M2/65‑1 (MQ=255) taAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCa < 1:38929247‑M2/65‑1 (MQ=255) TAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAt > 1:1596478‑M1/1‑68 (MQ=255) TAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCAt > 1:35892034‑M1/1‑68 (MQ=255) aggaggATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCg > 1:45125011/1‑67 (MQ=255) ggaggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGAc > 1:48531385/1‑68 (MQ=255) aggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGAc < 1:24686623/66‑1 (MQ=255) ggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACAt > 1:14145404/1‑67 (MQ=255) ggaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACAt > 1:30881360/1‑67 (MQ=255) gaTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGc > 1:46483149/1‑68 (MQ=255) aTTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCg > 1:36589383/1‑68 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:55923992/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:49220418/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:7478826/68‑1 (MQ=255) tttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCgg < 1:8878419/68‑1 (MQ=255) ttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGc < 1:2950140/68‑1 (MQ=255) ttAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGc < 1:39675374/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:45401477/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:20425208/68‑1 (MQ=255) aaaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCtt < 1:21711987/68‑1 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:43891514/1‑68 (MQ=255) aaTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTta > 1:1797838/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:26446739/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:44539351/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:28991246/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:6857612/1‑68 (MQ=255) aTAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTtat > 1:27405926/1‑68 (MQ=255) catgctgggcgtgaaatatagctggtaaaccgtaTAAGCCGCATGCCATCTCGACATGCGGCGTATAc < 1:19918397‑M1/34‑1 (MQ=255) aaGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATAc > 1:401083/1‑68 (MQ=255) ggCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACgg > 1:17531482/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:32274849/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:7215943/1‑68 (MQ=255) gCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt > 1:22939613/1‑68 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:11941848/67‑1 (MQ=255) cGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGt < 1:30213698/67‑1 (MQ=255) gTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGtt < 1:46068687/67‑1 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa < 1:33129153/67‑1 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa > 1:24110072/1‑67 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCa > 1:35190983/1‑67 (MQ=255) tGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAg < 1:57563755/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:31446884/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:4831250/68‑1 (MQ=255) gcgcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGc < 1:34551052/68‑1 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTGCAAGCta > 1:54197115/1‑68 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCta > 1:19408747/1‑68 (MQ=255) gcCGTTTGAAGTCGGCAATATTAAGCCCCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCt < 1:54436668/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtata < 1:21120919/68‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:6373806/67‑1 (MQ=255) cGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCtat < 1:34310782/67‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:33499236/68‑1 (MQ=255) gTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTatat < 1:31992690/68‑1 (MQ=255) aaGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTc > 1:57977058/1‑66 (MQ=255) aGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt < 1:53881038/68‑1 (MQ=255) aGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt < 1:21963922/68‑1 (MQ=255) gTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACt > 1:49827129/1‑67 (MQ=255) cAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAg < 1:1282972/67‑1 (MQ=255) tatTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATg < 1:41764932/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:942727/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:13658142/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:50667850/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:16537861/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:47084353/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:40829059/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:34954203/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:32768469/68‑1 (MQ=255) atTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:25626446/68‑1 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGccc > 1:13401629‑M1/1‑68 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGccc > 1:54858375‑M1/1‑68 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGccc > 1:4679928‑M1/1‑68 (MQ=255) TAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGc < 1:5141241‑M1/66‑1 (MQ=255) | CCGCGATCGCGGATAAAAAGGAGGATTTAAATAAGGCGTTGATGCGCCGTTTGAAGTCGGCAATATTAAGCCGCATGCCATCTCGACATGCGGCTTATACGGTTTACCAGCTATATTTCACTCCCAGCATGCCC > CP009273/1586819‑1586952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |