| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 724 (1.030) | 35 (0.060) | 9/100 | NT | 6.1% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 435 (0.700) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 128 total aligned reads displayed.
ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834963‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:11997689/1‑68 CCAGCCGCCGTCATACACGGAAACATTCTTCCCACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:49993635/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCACCCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:47684748/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CG < 1:18591325/68‑1 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CG < 1:24911458/68‑1 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:20830955/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:26250022/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:6627855/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:6598988/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:56937294/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:24746480/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:25525987/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:5522840/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:31556173/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:31734536/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:37503993/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:37889298/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:41434219/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:42150748/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:45183255/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:47534244/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:47819809/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:49102808/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:51161031/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:10649095/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:11656650/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:13402983/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:17373539/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:13763606/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:15939520/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑C > 1:15483440/1‑67 CCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGAGTGCGTACATAAAGGTTTCGGA‑‑CG > 1:18127146/1‑68 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCTTACATAAAGCTTTCGGA‑‑CGCGC > 1:26973680/1‑68 GCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:17206567/1‑68 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGTGTACATAAAGGTTTCGGA‑‑CGCGC > 1:40258214/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:36276133/1‑67 CCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC > 1:34848744/1‑67 CCGCCGTCATACACGGAAACATTCTTCAAACCCATGGCGCGTGAGTACATAAAGGTTACGGA‑‑CGCGC > 1:15224678/1‑67 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:19910498/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:25460260/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:18288501/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCC < 1:2447997/67‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:15648302/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:12215768/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:5983694/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:7202351/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC < 1:36103424/66‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:19043072/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:41678971/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:40835029/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:5272283/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:5343205/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:2329703/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:56611817/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:54884936/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:31608128/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCG < 1:54435135/65‑1 CGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAAGTTTCGGA‑‑CGCGCC < 1:54856885/67‑1 GTCATACCCGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTGCGGA‑‑CGCGCCATGGG < 1:33034616/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:33160814/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:49351450/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:45340956/68‑1 GTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGG < 1:10466676/68‑1 TACACGGAAACATTCTTCCAGCCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGG < 1:8652502/68‑1 TACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGG < 1:12204494/68‑1 TACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGG < 1:5157311/68‑1 ACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGA < 1:40821930/68‑1 ACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGA < 1:13476120/68‑1 CGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGA < 1:18962740/68‑1 GAAACATTCTTCCACCCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAAT < 1:15221343/68‑1 AAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGA < 1:45508941/67‑1 AAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGA < 1:29091488/67‑1 AACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGT < 1:27111816/68‑1 AACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGGTTCGGACGCGCGCCATGGGTTGGAAGAAT < 1:23103638/68‑1 AACATTCATCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGT < 1:39739802/68‑1 TTCTTCCAACCCAGGGCGCGTCCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCC < 1:7884424/68‑1 CTTCCACCCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:52276738/68‑1 CTTCCACCCCATGGCGCGTGCGGACATAAAGGGGGCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:12130479/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:32639263/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:29576574/68‑1 CTTCCAACCCATGGCGCGTGCGTACATAAAGGGTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:29280482/68‑1 TTCCAACCCATGGCGCGTGCGTACATAACGGTTTCGGA‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:29213503/67‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:21325959/68‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:22061156/68‑1 TCCAACCCATGGCGCGTGCGTACATAAAGGTTGCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:12900953/68‑1 TCCAACCCAGGGCGCGGGCGTACATAAAGGTTTCGGACGCGCGCCATGGGTTGGAAGAATGTTTCCGT < 1:11740462/68‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA < 1:40363099/68‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAA < 1:37985012/68‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:57568463/67‑1 A‑‑CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCA < 1:22844249/67‑1 CGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAA > 1:49532459/1‑68 CGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAA > 1:9757212/1‑68 CGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAA > 1:13846828/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:23789214/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:37905974/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:21602194/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:52548937/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > 1:51602643/1‑68 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAA < 1:4571349/67‑1 GCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGAACCAAAAAA > 1:26999248/1‑68 ACCAGCCGCCGTCATACACGGAAACATTCTTCCAACCCATGGCGCGTGCGTACATAAAGGTTTCGGA‑‑CGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1834963‑1834892‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑a‑‑cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAA > CP009273/1834923‑1834988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |