| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 724 (1.030) | 35 (0.060) | 9/100 | NT | 6.1% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 435 (0.700) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 681 total aligned reads displayed.
AGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAT > CP009273/1834856‑1834989 | gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGcc < 1:48690837/67‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCa > 1:45353740/1‑68 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCa > 1:35758485/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:27531284/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:47712823/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:38518154/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:29089042/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:26155762/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:54710580/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:20732571/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:55965199/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:6385165/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:11961192/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:46305373/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:45521012/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCAGGGGt > 1:36881828/1‑68 (MQ=255) aaGTTCCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:47995106/67‑1 (MQ=255) gtcatacacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATggg < 1:33160814‑M2/6‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:34270290/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:45033645/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:3733163/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:22237311/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:50664769/68‑1 (MQ=255) tacacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTgg < 1:5157311‑M2/10‑1 (MQ=255) tCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaa > 1:54942776/1‑68 (MQ=255) acggaaacattcttccaacccatgGCGCG‑‑TCCGAACCCTTTATGTACGCACGCGCCATGGGTTGgaag < 1:29280482‑M1/44‑1 (MQ=255) acacggaaacattcttccaacccctggcgcgtgcgtacataaaggtttcggccgcgcCATGGGTTGga < 1:52421939‑M2/11‑1 (MQ=255) acacggaaacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGga < 1:13476120‑M2/11‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:43453103/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:55533895/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:25122806/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:56406427/68‑1 (MQ=255) ggaaacattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGGACGCGCCCTGGGTTGgaagaa < 1:7884424‑M1/46‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:22815503/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:2586061/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:15095101/1‑68 (MQ=255) tACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:3925614/68‑1 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:17351499/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:12806635/1‑68 (MQ=255) aCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt > 1:32304415/1‑68 (MQ=255) aacattcttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGGAAGAATGt < 1:27111816‑M2/18‑1 (MQ=255) attcttccaacccatgGCGCGCGTCCGAACCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGtt < 1:23103638‑M1/52‑1 (MQ=255) gCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTcc < 1:5906018/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:43994697/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:41489757/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:28468955/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:34793686/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:11228218/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:18757056/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:16892215/68‑1 (MQ=255) tccaacccagggcgcgggcgtacataaaggtttcggacgcgcgcCATGGGTTGGAAGAATGTTTCCgt < 1:11740462‑M2/24‑1 (MQ=255) cttccaccccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGGAAGAATGTTTCCgt < 1:52276738‑M2/24‑1 (MQ=255) cttccaacccatggcgcgtgcgtacataaaggtttcggacgcgcCATGGGTTGGAAGAATGTTTCCgt < 1:24811141‑M2/24‑1 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt > 1:51408545/1‑68 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtg < 1:7389879/67‑1 (MQ=255) ccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa < 1:12204494‑M1/58‑1 (MQ=255) ccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGCTGGAAGAATGTTTCCGTGTa < 1:8652502‑M1/58‑1 (MQ=255) cccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAc < 1:23361782‑M1/62‑1 (MQ=255) gGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:19910498‑M1/66‑1 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:53359347/67‑1 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCAGTGTATGAcggcg > 1:29830596/1‑67 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGCGTTGGAAGAATGTTTCCGAGTATGAcggcgg > 1:19640921/1‑68 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:40835029‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:5272283‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:32598237‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:31608128‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:54338919‑M1/65‑1 (MQ=255) CGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:18320202‑M1/65‑1 (MQ=255) G‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:50173445‑M1/1‑67 (MQ=255) G‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg > 1:10649095‑M1/1‑67 (MQ=255) ggccGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTgg < 1:36170645/65‑1 (MQ=255) TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGt < 1:2665252‑M1/67‑1 (MQ=255) ccGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGTATGTTTCCGTGTATGACGGCGGCTGGTa < 1:15659645/67‑1 (MQ=255) ccGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTa < 1:14316758/67‑1 (MQ=255) ccGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTa < 1:3987598/67‑1 (MQ=255) cGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACg < 1:41910068/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:57114131/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:21351526/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:1016398/68‑1 (MQ=255) gAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGa < 1:32884551/68‑1 (MQ=255) aaCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAAt < 1:46690805/68‑1 (MQ=255) aaCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAAt < 1:42881771/68‑1 (MQ=255) aaCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAAt < 1:44184143/68‑1 (MQ=255) aCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATg > 1:4710802/1‑68 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:40289398/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:16222631/68‑1 (MQ=255) cTTTATGTACGCACGCGCCATGGGCTGGCAGTATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGa < 1:53798133/68‑1 (MQ=255) tGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGagcagc > 1:57627698/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:8373569/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:9229746/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:21798991/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:17964996/1‑68 (MQ=255) gTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCg > 1:31196086/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:6832361/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:15380219/1‑68 (MQ=255) cacgcGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCa > 1:24103547/1‑68 (MQ=255) cgcgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaaa > 1:49532459‑M2/6‑68 (MQ=255) cgcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaaaaa > 1:9757212‑M2/4‑68 (MQ=255) gcCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCaaaaaa > 1:37905974‑M2/3‑68 (MQ=255) cATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAt > 1:19113858/1‑67 (MQ=255) | AGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGGTACGAATGGAGCAGCGATCCAAAAAAT > CP009273/1834856‑1834989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |