| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1834892 = | 724 (1.030) | 35 (0.060) | 9/100 | NT | 6.1% | coding (1169/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase |
| ? | CP009273 | 1834923 = | 435 (0.700) | coding (1200/1308 nt) | ynjE | molybdopterin synthase sulfurtransferase | |||||
Only 100 of 841 total aligned reads displayed.
CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGC > CP009273/1834826‑1834959 | ttttttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatggc > 1:12470097‑M1/67‑68 (MQ=255)ttttttggatcgctgctccattcgtaccagccgccgtcatacacggaaacattcttccaacccatggc > 1:23789214‑M1/67‑68 (MQ=255)cTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGgcgc > 1:55945613/1‑68 (MQ=255) tATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGgcgc > 1:12091454/1‑67 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:30339262/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:53422710/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tcc > 1:17897540/1‑68 (MQ=255) ggAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑Tc < 1:45914580/67‑1 (MQ=255) aaaGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGa > 1:20539861/1‑68 (MQ=255) aaGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:57934900/1‑68 (MQ=255) aaGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:22416997/1‑68 (MQ=255) aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:8054261/1‑67 (MQ=255) aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:5012016/1‑67 (MQ=255) aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaa > 1:50580266/1‑67 (MQ=255) gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaaa > 1:36664392/1‑67 (MQ=255) gCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGaaa > 1:21167617/1‑67 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:17260094/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:38807870/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAcc < 1:27091174/67‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:7756732/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAc < 1:56580604/66‑1 (MQ=255) gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCt < 1:48582713/68‑1 (MQ=255) tGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCtt > 1:42632901/1‑68 (MQ=255) ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCttt < 1:32571458/68‑1 (MQ=255) ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCttt < 1:6520388/68‑1 (MQ=255) aaTATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTa < 1:4067616/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:18358080/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:18800454/67‑1 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATg > 1:35031389/1‑68 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATg > 1:53908981/1‑68 (MQ=255) atatCAAACCAGAGCAGCAAGTTTCAATCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTAt < 1:38174523/67‑1 (MQ=255) tatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGt < 1:36131413/68‑1 (MQ=255) tatCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGt < 1:52033227/68‑1 (MQ=255) atCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGt > 1:19621935/1‑67 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCTGAAACCTTTATGTacg < 1:45336206/68‑1 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacg < 1:54958280/68‑1 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacg < 1:37910655/68‑1 (MQ=255) cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacg < 1:44092592/68‑1 (MQ=255) aaaCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgc > 1:45541163/1‑68 (MQ=255) aaaCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgc > 1:29226853/1‑68 (MQ=255) aCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:24275248/1‑68 (MQ=255) aCCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:23148826/1‑68 (MQ=255) ccAGAGCAGCAAGTTTCATTCTCCTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcacg < 1:14420521/68‑1 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:43340917/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:57490840/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:19978672/1‑67 (MQ=255) ccAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcac > 1:16310591/1‑67 (MQ=255) cAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTacgcacgc < 1:35747259/68‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:44871592/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:37241822/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:54654958/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:51395505/65‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACgcgc < 1:34489448/66‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACgcgc < 1:52499038/66‑1 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCa > 1:5154715/1‑68 (MQ=255) gcagcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCa > 1:8969990/1‑68 (MQ=255) gcagcaAGGTTCATTATACTGCTGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCAcgcg < 1:10014955/65‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:2583325/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:11114005/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:11812059/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:15238580/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:22067512/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:24903171/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:37410020/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:26155762/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:49409402/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATggg < 1:32889471/67‑1 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:8537483/1‑68 (MQ=255) aaGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGt > 1:41575688/1‑68 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTgg < 1:5083300/67‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:28399100/68‑1 (MQ=255) ttCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:47914358/68‑1 (MQ=255) acggaaacattcttccaacccatgGCGCGCGTCCGCAACCTTTATGTACGCACGCGCCATGGGTTGga < 1:12900953‑M1/44‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:2166859/68‑1 (MQ=255) aTTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga < 1:43966173/68‑1 (MQ=255) ttCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaagaa > 1:55431671/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:47312987/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt < 1:31505023/68‑1 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:52747020/1‑68 (MQ=255) tCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAAACTTTATGTACGCACGCGCCATGGGTTGGAAGAAt > 1:40187348/1‑68 (MQ=255) tACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGt < 1:3925614/68‑1 (MQ=255) acattcttccaacccatgGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGATGAATGtt < 1:39739802‑M1/50‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:22732747/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:10468703/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:16892215/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt > 1:1580304/1‑68 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:14885767/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:56302905/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:13540128/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:46734038/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:28974358/68‑1 (MQ=255) ggCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgt < 1:11495838/68‑1 (MQ=255) cACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCgtgt > 1:33341996/1‑68 (MQ=255) aCCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa > 1:31182115/1‑68 (MQ=255) aCCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTa > 1:6213051/1‑68 (MQ=255) cgcgcgcG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggc > 1:31856341/2‑68 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg > 1:27614339/1‑67 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcc > 1:26947933/1‑66 (MQ=255) cgcgcg‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCAGTGTATGAcggcg > 1:29830596/1‑67 (MQ=255) GCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGAcggcg < 1:7202351‑M1/66‑1 (MQ=255) | CTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCG‑‑TCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGC > CP009273/1834826‑1834959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |