| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2786463 = | 602 (0.860) | 32 (0.050) | 6/102 | NT | 5.7% | coding (370/1281 nt) | gabT | 4‑aminobutyrate aminotransferase, PLP‑dependent |
| ? | CP009273 | 2786484 = | 503 (0.790) | coding (391/1281 nt) | gabT | 4‑aminobutyrate aminotransferase, PLP‑dependent | |||||
GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2786533‑2786463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGA > CP009273/2786484‑2786550 GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGC > 1:8767476/1‑68GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGC > 1:27905613/1‑68GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGC > 1:33477804/1‑68GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCGAAAAGCGATGGTGCCGCTACGTTTGGTGGC > 1:10819864/1‑68 cccGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGAGGGTGCCGCTACGTGTGGTGGCG > 1:36944145/4‑68 CCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCG > 1:38427570/1‑68 CCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCG > 1:53522/1‑68 CCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCG > 1:31262173/1‑68 CAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGG < 1:44386542/68‑1 CAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGG < 1:17246538/68‑1 CAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGG < 1:46962530/68‑1 CAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCG < 1:866539/67‑1 CAGCGTGTAATGCGGGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCG < 1:1357062/67‑1 AGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC > 1:23490504/1‑68 AGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC > 1:15691811/1‑68 tTGTAATGCGAGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC < 1:46263293/64‑1 GTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC < 1:48893562/65‑1 GTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC < 1:15097144/65‑1 GTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC < 1:36882397/65‑1 GTGTAATGCGTGCGCCCGGGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCA < 1:15104752/66‑1 TGTAATGCGTGCGCCCGTGATACGGCCGGCTAAAAGCGATGGTGCGGATACGTTTGGTGGCGGCACC < 1:11836648/67‑1 AATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCG < 1:33234288/68‑1 AATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCG < 1:55852221/68‑1 cTGCGGGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:2906559/67‑1 ATGCGTGCGCCCGTGATCCGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:15775926/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:35614795/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:47031527/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:8035873/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:782209/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:29649333/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:14385089/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:52268113/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:7706021/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:10581239/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:24308567/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:46159121/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:57775885/68‑1 ATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:56796412/68‑1 ATGCGGGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:13359660/68‑1 ATGCGAGCGCCCGTGATCCGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGC < 1:10028538/68‑1 GCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGCTT < 1:16717625/68‑1 GCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGCTT < 1:57247810/68‑1 GCGAGCGCCCGTGATACGCGCCGCTAAAAGCGAAGGTGCCGCTACGGTTGGTGGCGGCACCATCGCTT < 1:3610073/68‑1 CGTCATACGCGCCCCTAAAAGCGAAGGCGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCG < 1:16435332/68‑1 gtcATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGGGGCGGCACCATCGCTTTTAGCGGCGC < 1:49412628/65‑1 ggGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGC < 1:49481113/66‑1 GATACGCGCCGCTAAACGCGATGGCGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGCG < 1:29143058/67‑1 GATACGCGCCGCTAAACGCGATGGCGCCGCTACGTTCGGGGGCGGCACCATCGCTTTTAGCGGCGCG < 1:9069255/67‑1 GATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGCG < 1:54651874/67‑1 ATACGCGCCGCTAAAAGCGATGGGGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGCGTA < 1:6245037/68‑1 tcCGCGCCGCTAAAAGCGATGGCGCCGCTACGTTTGGGGCCGGCACCATCGCTTTTAGCGGCGCGTA < 1:27445638/65‑1 TACTCGCCGCTAAAAGCGATGGTGCCGCAACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGCGTA < 1:40798901/67‑1 TACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGCACCATCGCTTTTAGCGGCGCGTA < 1:55146721/67‑1 GCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG > 1:39441603/1‑68 GCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGCCAAG > 1:13505878/1‑68 CGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG > 1:3719251/1‑68 CGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGACAAGG > 1:54194383/1‑68 tGCACCATCGCTTTTAGAGGCGCGTATCACGTGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:15841827/65‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:35636271/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT < 1:19373404/68‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT < 1:52390097/68‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT < 1:16131857/68‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:25800445/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:45273859/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:24524088/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT < 1:12173227/68‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:22947637/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:55901182/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:4079027/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGT > 1:23201884/1‑68 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:54868286/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:34180426/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:27424894/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:28619037/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:52099798/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:37236585/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:8910777/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGG < 1:39571410/67‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:6938207/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:18875576/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:10099113/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:8056330/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:8444869/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:15477397/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:8811077/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:24096155/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:29738113/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:48027778/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:35622971/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:46530406/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:44891625/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:39223251/66‑1 GGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAG < 1:39741518/66‑1 GCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGCCCGGCAAGGTG > 1:5681497/1‑68 GCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGCCCGGCAAGGTG > 1:41392432/1‑68 GCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTG > 1:22462411/1‑68 GCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTG > 1:51074963/1‑68 GCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTG > 1:38445243/1‑68 CACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGA > 1:34266418/1‑68 CACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTG < 1:29297070/67‑1 GCCAGCGTGTAATGCGTGCGCCCGTGATACGCGCCGCTAAAAGCGATGGTGCCGCTACGTTTGGTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2786533‑2786463‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGA > CP009273/2786484‑2786550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |