New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2786463 =602 (0.860)32 (0.050) 6/102 NT 5.7% coding (370/1281 nt) gabT 4‑aminobutyrate aminotransferase, PLP‑dependent
?CP009273 2786484 = 503 (0.790)coding (391/1281 nt) gabT 4‑aminobutyrate aminotransferase, PLP‑dependent

Only 100 of 738 total aligned reads displayed.

CGCCAAGAAAACGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCT  >  CP009273/2786396‑2786530
                                                                   |                                                                   
 caccttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgc                                                                    >  1:51074963‑M1/67‑68 (MQ=255)
  accttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:16131857‑M1/3‑1 (MQ=255)
  accttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:52390097‑M1/3‑1 (MQ=255)
   ccttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgccg                                                                  >  1:3719251‑M1/65‑68 (MQ=255)
   ccttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:27424894‑M1/3‑1 (MQ=255)
   ccttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:34180426‑M1/3‑1 (MQ=255)
   cAAGAAAACGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGcgcc                                                                   <  1:6888806/67‑1 (MQ=255)
    cttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:8056330‑M1/3‑1 (MQ=255)
    cttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:46530406‑M1/3‑1 (MQ=255)
    cttgccggtcagcgccagcgtgtaatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgcc                                                                   <  1:24096155‑M1/3‑1 (MQ=255)
        aaaCGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGccac                                                              <  1:9074580/67‑1 (MQ=255)
        aaaCGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGccac                                                              <  1:20837067/67‑1 (MQ=255)
          aCGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCaa                                                           <  1:26742110/68‑1 (MQ=255)
              tgctgGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACg                                                        <  1:17268151/67‑1 (MQ=255)
              tgctgGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACg                                                        <  1:38623053/67‑1 (MQ=255)
               gctgGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTa                                                      <  1:15166285/68‑1 (MQ=255)
               gctgGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTa                                                      <  1:39475309/68‑1 (MQ=255)
               gctgGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTa                                                      <  1:10685100/68‑1 (MQ=255)
                  ggTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCg                                                   >  1:5318848/1‑68 (MQ=255)
                  ggTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCg                                                   >  1:41700004/1‑68 (MQ=255)
                     tACGACCTGATCCGATGGGGTGGAAAAGGCGGTAAAAATCGCCCGCGCCGCCTCCAAACGTAGCGGc                                                 <  1:24533032/67‑1 (MQ=255)
                     tACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGc                                                 <  1:43618231/67‑1 (MQ=255)
                      aCGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCCCCAAACGTAGCGGCa                                                >  1:18186141/1‑67 (MQ=255)
                       cGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCAcc                                              <  1:26374848/68‑1 (MQ=255)
                       cGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCAcc                                              <  1:14954199/68‑1 (MQ=255)
                        gACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:43393787/1‑68 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCCCCAAACGTAGCGGCACCa                                             >  1:23641964/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:28016813/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:49280111/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:34548094/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:36227848/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:49729022/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:564306/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:22554977/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:17499965/1‑67 (MQ=255)
                         aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                             >  1:18994924/1‑67 (MQ=255)
                            ggTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                         <  1:8693154/68‑1 (MQ=255)
                            ggTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                         <  1:44477650/68‑1 (MQ=255)
                               tCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCtt                                       <  1:42558453/67‑1 (MQ=255)
                                   aaGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgc                                  >  1:33910843/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:29248491/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:36843463/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:21428893/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:48187033/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:45896832/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:32963609/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:1563123/1‑68 (MQ=255)
                                    aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                 >  1:40799970/1‑68 (MQ=255)
                                       ggTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcggc                               <  1:10504971/67‑1 (MQ=255)
                                       ggTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcggc                               <  1:29979763/67‑1 (MQ=255)
                                         tGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGgcgc                             <  1:20556525/67‑1 (MQ=255)
                                         tGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGgcgc                             <  1:31963660/67‑1 (MQ=255)
                                          ggATAACGCGGTAAATATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGcgcg                            <  1:47270029/67‑1 (MQ=255)
                                          ggAACACGCGGTAAACATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGcgcg                            <  1:48982871/67‑1 (MQ=255)
                                          ggAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGcgcg                            <  1:40093234/67‑1 (MQ=255)
                                          ggAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGcgcg                            <  1:35858979/67‑1 (MQ=255)
                                            tacgcgccgctaaaagcgatggtGCCGCCACCAAACGTAGCGGCCCCATCGCTTTTAGCGGCGCGTAt                         <  1:6245037‑M1/45‑1 (MQ=255)
                                            aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                          <  1:28930339/67‑1 (MQ=255)
                                            aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                          <  1:12314919/67‑1 (MQ=255)
                                             aaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATc                        <  1:5054458/68‑1 (MQ=255)
                                              cgcgccgctaaaagcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATc                        <  1:54651874‑M1/46‑1 (MQ=255)
                                               aCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCAc                      >  1:55424289/1‑68 (MQ=255)
                                                   ggTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACggg                   <  1:51945346/67‑1 (MQ=255)
                                                   ggTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACggg                   <  1:1024636/67‑1 (MQ=255)
                                                      aaaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgca               <  1:55933290/68‑1 (MQ=255)
                                                       aaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcac              <  1:57110321/68‑1 (MQ=255)
                                                       aaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcac              <  1:45277010/68‑1 (MQ=255)
                                                        aaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacg             <  1:58086255/68‑1 (MQ=255)
                                                        aaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacg             <  1:48608520/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:25427759/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:17787717/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:5376037/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:7568487/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:3529190/68‑1 (MQ=255)
                                                         aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc            <  1:1164072/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:32567354/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:38372151/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:39184970/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:6655622/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:51553974/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:26034151/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:7213613/68‑1 (MQ=255)
                                                          aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca           <  1:12791107/68‑1 (MQ=255)
                                                           tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt          <  1:23094907/68‑1 (MQ=255)
                                                           tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt          <  1:2503429/68‑1 (MQ=255)
                                                           tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt          <  1:44760401/68‑1 (MQ=255)
                                                           gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCCCGCAt          <  1:13359660‑M1/60‑1 (MQ=255)
                                                           gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt          <  1:57775885‑M1/60‑1 (MQ=255)
                                                           gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt          <  1:56796412‑M1/60‑1 (MQ=255)
                                                           gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGGATCACGGGCGCTCGCAt          <  1:10028538‑M1/60‑1 (MQ=255)
                                                            cGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTGGCGGCGCGTATCACGGGCGCACGCAtt         <  1:30587848/68‑1 (MQ=255)
                                                            cGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAtt         <  1:31493940/68‑1 (MQ=255)
                                                            cGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAtt         <  1:37566234/68‑1 (MQ=255)
                                                             gCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAtt         >  1:33300057/1‑67 (MQ=255)
                                                              tacgcgCCGCCAGCAACCGTAGCGGCACCATCGCTTTTCGCGGCGCGTATCGCGGGCGCACGCATTac       >  1:18534352/3‑68 (MQ=255)
                                                              tacgcgCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTac       >  1:28519114/3‑68 (MQ=255)
                                                              tacgcgCCGCCACCAAACGTAGCGGCACCATCGCGTTTAGCGGCGCGTATCACGGGCGCACGCAGTac       >  1:22072253/3‑68 (MQ=255)
                                                                cgcgCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTacac     <  1:14051158/68‑1 (MQ=255)
                                                                 gcgcCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTacac     >  1:19431061/1‑67 (MQ=255)
                                                                 gcgcCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACg    <  1:16438473/68‑1 (MQ=255)
                                                                   |                                                                   
CGCCAAGAAAACGCTGCTGGTTACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCT  >  CP009273/2786396‑2786530

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.