New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2786463 =602 (0.860)32 (0.050) 6/102 NT 5.7% coding (370/1281 nt) gabT 4‑aminobutyrate aminotransferase, PLP‑dependent
?CP009273 2786484 = 503 (0.790)coding (391/1281 nt) gabT 4‑aminobutyrate aminotransferase, PLP‑dependent

Only 100 of 828 total aligned reads displayed.

TACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGAA  >  CP009273/2786417‑2786551
                                                                   |                                                                   
 aCGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCa                                                                     >  1:56602213/1‑67 (MQ=255)
 aCGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCa                                                                     >  1:17624290/1‑67 (MQ=255)
   gACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                                                  >  1:43393787/1‑68 (MQ=255)
    aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                                                  >  1:49280111/1‑67 (MQ=255)
    aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                                                  >  1:49729022/1‑67 (MQ=255)
    aCCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCa                                                                  >  1:53247400/1‑67 (MQ=255)
     ccGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCAt                                                                 <  1:57298461/67‑1 (MQ=255)
      cGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCg                                                               <  1:51660840/68‑1 (MQ=255)
      aatgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgccgctacgtttggtggcggcACCATCg                                                               <  1:55852221‑M2/7‑1 (MQ=255)
       ggTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                                              <  1:10151390/68‑1 (MQ=255)
       ggTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                                              <  1:30010853/68‑1 (MQ=255)
       ggTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                                              <  1:2263073/68‑1 (MQ=255)
       atgcgtgcgcccgtgatacgcgccgctaaaagcgatggtgccgctacgtttggtggcggcACCATCGc                                                              <  1:24308567‑M2/8‑1 (MQ=255)
        gTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGc                                                              <  1:51237586/67‑1 (MQ=255)
         gcgagcgcccgtgatacgcgccgctaaaagcgaaggtgccgctacggttggtggcggcACCATCGCtt                                                            <  1:3610073‑M2/10‑1 (MQ=255)
          tCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCtt                                                            <  1:45502489/67‑1 (MQ=255)
          tCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCtt                                                            <  1:26539191/67‑1 (MQ=255)
           ccGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCtttt                                                          >  1:48074823/1‑68 (MQ=255)
            cGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTa                                                         <  1:770389/68‑1 (MQ=255)
              aaGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgc                                                       >  1:46945107/1‑68 (MQ=255)
               aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                                      >  1:13906583/1‑68 (MQ=255)
               aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                                      >  1:45896832/1‑68 (MQ=255)
               aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                                      >  1:44395583/1‑68 (MQ=255)
               aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                                      >  1:33150300/1‑68 (MQ=255)
               aGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAgcg                                                      >  1:34061719/1‑68 (MQ=255)
                    tGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGgcgc                                                  <  1:30580701/67‑1 (MQ=255)
                     gatacgcgccgctaaaagcgatggtgccgctacgtttggtggcggcACCATCGCTTTTAGCGGcgcg                                                 <  1:54651874‑M2/21‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:27451772/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:50604525/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:39175730/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:23152102/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:6071573/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:43746785/67‑1 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               >  1:17879967/1‑67 (MQ=255)
                       aaaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTa                                               <  1:55341021/67‑1 (MQ=255)
                        aaaCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATc                                             <  1:40658833/68‑1 (MQ=255)
                         cgcgccgctaaaagcgatggtGCCGCCCCCGAACGTAGCGGCGCCATCGCGTTTAGCGGCGCGTATc                                             <  1:9069255‑M1/46‑1 (MQ=255)
                          aCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCAc                                           >  1:37027125/1‑68 (MQ=255)
                          aCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCAc                                           >  1:28106879/1‑68 (MQ=255)
                          aCGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCAc                                           >  1:6520417/1‑68 (MQ=255)
                              ggTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACggg                                        <  1:10545148/67‑1 (MQ=255)
                              ggTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACggg                                        <  1:26314754/67‑1 (MQ=255)
                                 aaaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGgcgc                                     >  1:38159206/1‑67 (MQ=255)
                                 aaaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgca                                    <  1:251468/68‑1 (MQ=255)
                                 aaaaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgca                                    <  1:32682691/68‑1 (MQ=255)
                                   aaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacg                                  <  1:21893364/68‑1 (MQ=255)
                                   aaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacg                                  <  1:22222788/68‑1 (MQ=255)
                                   aaaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcac                                   >  1:2558569/1‑67 (MQ=255)
                                    aagcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc                                 <  1:16717625‑M1/58‑1 (MQ=255)
                                    aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc                                 <  1:33515962/68‑1 (MQ=255)
                                    aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc                                 <  1:57827461/68‑1 (MQ=255)
                                    aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc                                 <  1:56997008/68‑1 (MQ=255)
                                    aaTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgc                                 <  1:53897576/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:24596967/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:46410321/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:20809128/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:12791107/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:7291156/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:31479305/68‑1 (MQ=255)
                                     aTCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGcgcacgca                                <  1:29364728/68‑1 (MQ=255)
                                      tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTCGCGGCGCGTATCACGGGCGCACGCAt                               <  1:32162646/68‑1 (MQ=255)
                                      tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt                               <  1:15585036/68‑1 (MQ=255)
                                      tCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt                               <  1:16038472/68‑1 (MQ=255)
                                      gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGgcgcccgcag                               <  1:2906559‑M1/60‑2 (MQ=255)
                                      gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAt                               <  1:52268113‑M1/60‑1 (MQ=255)
                                      gcgatggtGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGGATCACGGGCGCTCGCAt                               <  1:10028538‑M1/60‑1 (MQ=255)
                                       cGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCAtt                              <  1:36813977/68‑1 (MQ=255)
                                         tacgcgCCGCCAGCAAACGTAGCGGCACGATCGCGTTTCGCGGCGCGTATCACGGGCGCACGCATTac                            >  1:18466388/3‑68 (MQ=255)
                                         tacgcgCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTac                            >  1:28519114/3‑68 (MQ=255)
                                         tacgcgCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTac                            >  1:47346250/3‑68 (MQ=255)
                                           ggtGCCGCCACCAAACGTATCCGCACCATCGCTTTTAGCCGGCCGTATCACGGGCGCACGCATTaca                           <  1:11836648‑M1/64‑1 (MQ=255)
                                           cgcgCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTacac                          >  1:17358958/1‑68 (MQ=255)
                                            gcgcCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACg                         <  1:40062575/68‑1 (MQ=255)
                                             tGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCCCGGGCGCACGCATTacac                          <  1:15104752‑M1/65‑1 (MQ=255)
                                              GCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTacac                          <  1:48893562‑M1/65‑1 (MQ=255)
                                                CGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTg                      <  1:866539‑M1/67‑1 (MQ=255)
                                                 GCCACCAAACGTAGCGGCACCATCGCTTTTCGCGGCGCGTATCACGGGCGCACGCATTACACGCTGgc                    >  1:10819864‑M1/1‑68 (MQ=255)
                                                   caccaAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGgc                    >  1:52639440/1‑66 (MQ=255)
                                                    accaAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGgc                    >  1:14691460/1‑65 (MQ=255)
                                                    accaAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGgc                    >  1:23905899/1‑65 (MQ=255)
                                                    accaAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCt                 <  1:13372792/68‑1 (MQ=255)
                                                        aaCGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGAcc             >  1:3849109/1‑68 (MQ=255)
                                                        aaCGTAGCGGCACAATCGCTTTTAGCCCCGCGTATCACGGGCGCACGCATTACACGCAGGCGCTGAcc             >  1:27080951/1‑68 (MQ=255)
                                                         aCGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCg            >  1:19233695/1‑68 (MQ=255)
                                                         aCGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCg            >  1:1253614/1‑68 (MQ=255)
                                                         aCGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCg            >  1:42497281/1‑68 (MQ=255)
                                                                ggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAgg      <  1:39571410‑M2/64‑1 (MQ=255)
                                                                ggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAg       <  1:44891625‑M2/63‑1 (MQ=255)
                                                                ggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAg       <  1:8056330‑M2/63‑1 (MQ=255)
                                                                ggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAg       <  1:18875576‑M2/63‑1 (MQ=255)
                                                                ggcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAg       <  1:6938207‑M2/63‑1 (MQ=255)
                                                                 gcACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGCCCGGCAAGGTg    >  1:41392432‑M2/3‑68 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:20104866/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:34401431/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:35046602/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:35694037/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:48520402/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:56247853/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:37537760/68‑1 (MQ=255)
                                                                   aCCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGaa  <  1:1641931/68‑1 (MQ=255)
                                                                   |                                                                   
TACGACCGGTTCCGAAGCGGTGGAAAACGCGGTAAAAATCGCCCGCGCCGCCACCAAACGTAGCGGCACCATCGCTTTTAGCGGCGCGTATCACGGGCGCACGCATTACACGCTGGCGCTGACCGGCAAGGTGAA  >  CP009273/2786417‑2786551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.