BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2911375	NA (NA)	8 (0.010)	6/92	NT	NA	intergenic (+203/+29)	barA/gudD	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/(D)‑glucarate dehydratase 1
*	?	CP009273	= 2911381	NA (NA)	8 (0.010)	6/92	NT	NA	intergenic (+209/+23)	barA/gudD	hybrid sensory histidine kinase, in two‑component regulatory system with UvrY/(D)‑glucarate dehydratase 1

Only 100 of 213 total aligned reads displayed.

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2911299‑2911375

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccggctcTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCTAC  <  CP009273/2911381‑2911315

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCA                                                                              <  1:39159014/68‑1

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCA                                                                              >  1:4250487/1‑68

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCA                                                                              >  1:19941616/1‑68

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCA                                                                              >  1:46109024/1‑68

   ATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAA                                                                            <  1:6901421/67‑1

   ATTAAAAAATAATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAA                                                                            >  1:24512464/1‑67

    TTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACC                                                                          >  1:45573760/1‑68

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:47020439/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:2834166/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:32893781/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:34574928/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:35342291/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:36522594/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:37431296/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:40406/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:10456677/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:48380397/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:51135438/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:51383008/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:5207869/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:53718625/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:54305561/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:6553221/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:7818517/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:8356747/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:8683892/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:9303585/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:2264953/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:17004735/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:15572334/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:16702343/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:24024869/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:21706859/68‑1

       AAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       <  1:19342159/68‑1

       AAAAATGAGGTAGAGCTGATACATAGCAAAACAGGCTATTTTGCGTTTAGCATCAGTCGCAAACCGGC                                                                       <  1:57834/68‑1

        AAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCT                                                                      <  1:7222904/68‑1

        AAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       >  1:54660067/1‑67

        AAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       >  1:55800729/1‑67

        AAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGC                                                                       >  1:46649310/1‑67

        AAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATAAGTCTCAAACCGGa                                                                       >  1:25930006/1‑66

         AAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC                                                                     <  1:37146755/68‑1

         AAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC                                                                     <  1:54105295/68‑1

         AAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC                                                                     <  1:47963077/68‑1

         AAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC                                                                     <  1:10129793/68‑1

                     CCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAAC                                                                           >  1:41981140/1‑50

                                               TTGCGTTTAGCATCAGTCTCAAACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAA                               >  1:27017373/1‑68

                                                   GTTTAGCATCAGTCTCAAACCGGGTCGATCTGGAGCCGGTTTGAGGCTGATGCTAAACGCAAAATAG                            >  1:37909985/1‑67

                                                        GCATCAGTCTCAAACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTT                      >  1:56191700/1‑68

                                                           TCAGTCTCAAACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGT                    >  1:5015614/1‑67

                                                               TCTCAAACCGGCTCTATATGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCGGGTGTGCTAT               >  1:13535640/1‑68

                                                                  aatACCGGCTCTATCTGGAGCCGGTTTGAGACTGATTCTAAACGCAAAATAGCCTGTTGTGCTATGTA            <  1:20310791/65‑1

                                                                   AAACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTAT           <  1:31603588/68‑1

                                                                     ACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCA         <  1:26083363/68‑1

                                                                     ACCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGGATCA         >  1:12667750/1‑68

                                                                      CCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAG        >  1:49674976/1‑68

                                                                      CCGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAG        >  1:13604219/1‑68

                                                                      CCGGCTCCATCTGGAGCCGGTTTGAGAATGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAG        >  1:27493798/1‑68

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCACAATAGCCTGTTGTGCTATGTATCAGG       <  1:18974828/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:54936164/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:5703215/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:14157131/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:53530343/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       >  1:52611317/1‑68

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:7356991/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:7717714/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:16131329/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:51518923/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:10883860/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:9281375/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:25270638/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:9609606/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:22235674/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:25336015/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:26346826/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:26874580/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:28529824/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:30004128/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:32000717/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:32077507/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:33946014/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:34655126/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:49434092/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:216371/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:43768554/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:48838570/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:17211171/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:47159585/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:17329077/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:21577401/68‑1

                                                                       CGGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:4225098/68‑1

                                                                       CGGCGCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGG       <  1:29103019/68‑1

                                                                        GGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGT      <  1:30871294/68‑1

                                                                        GGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGT      <  1:44715689/68‑1

                                                                        GGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGT      <  1:53887235/68‑1

                                                                        GGCTCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGT      <  1:20515671/68‑1

                                                                           TCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCT    <  1:23901255/67‑1

                                                                           TCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCT    <  1:3120328/67‑1

                                                                           TCTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCT    >  1:15161957/1‑67

                                                                            CTATCTGTAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCTAC  <  1:55145492/68‑1

                                                                            CTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCTAC  <  1:32333092/68‑1

TGAATTAAAAAATGATGTAGACCTGATACATAGCACAACAGGCTATTTTGCGTTTAGCATCAGTCTCAAACCGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2911299‑2911375

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaccggctcTATCTGGAGCCGGTTTGAGACTGATGCTAAACGCAAAATAGCCTGTTGTGCTATGTATCAGGTCTAC  <  CP009273/2911381‑2911315

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.