New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 3015939870 (1.240)44 (0.070) 15/96 NT 5.8% coding (1265/2871 nt) xdhD putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding
?CP009273 = 3015996 673 (1.120)coding (1322/2871 nt) xdhD putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding

Only 100 of 263 total aligned reads displayed.

CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  CP009273/3015996‑3015931
                                                                                                                                             
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:7640047/1‑68
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:29951091/1‑68
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTAC                                                                           >  1:39602032/1‑68
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCACGTACCTTGGCACTTAC                                                                           >  1:13324425/1‑68
 TGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          <  1:4403672/68‑1
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCGCTTACG                                                                          >  1:49753962/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:27368873/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:55131467/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:40584692/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:30516529/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:32037423/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:18796618/1‑67
  GCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACG                                                                          >  1:51109578/1‑67
   CTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:24967339/68‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCTGGTACCATGGCACTTACGCC                                                                        >  1:55764560/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCATGTACCATGGCACTTACGCC                                                                        <  1:27066863/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:39493085/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:45909772/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:46665095/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:48151641/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:55416671/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:42964596/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:48985312/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:40299864/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:30214185/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:52171308/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:30860489/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:31514096/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:38803724/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:32670897/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:53939506/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:10435265/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:52999849/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:38444169/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:2163312/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:15187007/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:16476582/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:17012956/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:17099765/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:14355859/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:17388973/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:17498924/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:19316907/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:14207858/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:56574021/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:21074893/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:21238996/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:57261797/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:13038372/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:22763989/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:2333385/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:56469445/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:23979150/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:11146671/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:24574189/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        >  1:25132723/1‑67
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:10541373/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:25747628/67‑1
    TTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:26392101/67‑1
    TTTACGCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCC                                                                        <  1:50512214/67‑1
     TTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGC                                                                      <  1:26070716/68‑1
       ACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA                                                                    >  1:54580144/1‑68
                                           TCCACCCAGGTACCATGGCACTTACGCCGCCAACTCGCGCTTTTATGACATGGACGTTATGCTGTTTC                                >  1:28819143/1‑68
                                              ACCCAGGTACCATGGCACTTACGCCGCCACCTCGCTCTTGAATGACATGAACTTTATGGTGTTTCATG                             >  1:41239908/1‑68
                                                CCAGGTACCATGGCACTTACGCAGCCAACACGCTCTTTAATGACATGAACTTTATGGTGTTTCATGg                            >  1:31660483/1‑66
                                                     TACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGGCCTCGA                      >  1:47333783/1‑68
                                                     TACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGA                      >  1:36848480/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCTTTAATGTGATGAACTTTATGCTGTTTGATGCCCACGAG                     >  1:14800072/1‑68
                                                      ACCATGGCACTTACGCCGCCAACTCGCTCGTTAATGCCATGAACTTTATGCGGTTTCATGCCCACGAG                     >  1:44832071/1‑68
                                                        CATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGC                   >  1:11188422/1‑68
                                                         ATGGCACTTACGCCGCCCACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGC                   >  1:21901200/1‑67
                                                         ATGGCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGC                   >  1:34440004/1‑67
                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGCCATGATCTGTATGCGGTTTCATGCCCCCGAGGCGC                 >  1:33274517/1‑67
                                                           GGCACTTACGCCGCCAACTCGCTCTTTAATGACATGGACTTTATGCTGTTTCATGCCCACGAGCCGC                 >  1:54298827/1‑67
                                                            GCACTTACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGC               >  1:20319305/1‑68
                                                                  ACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTG         >  1:5996942/1‑68
                                                                  ACGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTG         >  1:32790163/1‑68
                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:36025307/68‑1
                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:27978943/68‑1
                                                                   CGCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:53507481/68‑1
                                                                   CGCCGCCAACTCGCGCTTTATTGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGG        <  1:13873641/68‑1
                                                                    GCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC       >  1:57506805/1‑68
                                                                    GCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC       >  1:2371935/1‑68
                                                                    GCCGCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGC       >  1:34815401/1‑68
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:44438933/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:780121/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:29007641/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:35303816/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:38152783/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:40191194/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:43361039/68‑1
                                                                       GCCAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGC    <  1:45201259/68‑1
                                                                        CCAACTCGCTCTTTAATGACATGAACTTTCTGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:51827491/68‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  1:29560077/68‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:29748775/67‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:51897369/67‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:41871077/67‑1
                                                                         CAACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCG   <  1:8300065/67‑1
                                                                         CAACTCGCGCTTTAATGCCATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  1:12193361/68‑1
                                                                         CAACTCCCTCTTTAATGACATGACCTTTCTGCTGGTTCCTGCCCACGAGGCGCGCGACCTGGCGGCGT  <  1:48039945/68‑1
                                                                                                                                             
CTGCTTTACTCGTATGGACGGCGATCGTCTGGTTATCCACGCCTCCACCCAGGTACCATGGCACTTACGCCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/3015865‑3015939
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccaACTCGCTCTTTAATGACATGAACTTTATGCTGTTTCATGCCCACGAGGCGCGCGACCTGGCGGCGT  <  CP009273/3015996‑3015931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.