| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3015939 | 870 (1.240) | 44 (0.070) | 15/96 | NT | 5.8% | coding (1265/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding |
| ? | CP009273 | = 3015996 | 673 (1.120) | coding (1322/2871 nt) | xdhD | putative hypoxanthine oxidase, molybdopterin‑binding/Fe‑S binding | |||||
Only 100 of 891 total aligned reads displayed.
TTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015929‑3016063 | aCGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGGCATTAAAGCGCGAGTtg < 1:12193361‑M2/68‑3 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:780121‑M2/68‑5 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggc < 1:44438933‑M2/68‑5 (MQ=255) gccgccAGGTCGCGCGCCTCGTGGGCAGGAAACAGCATAAAGTTGATGTAATTAAAGACCGCGTtggc < 1:35751419‑M2/68‑5 (MQ=255) ccAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg < 1:53507481‑M2/68‑9 (MQ=255) ccAGGTCGCGCGCCTCGTGGGCATGAAAAATCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcg < 1:13934227‑M2/68‑9 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:7324668/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:11099616/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:45622357/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:48321529/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:49109522/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:15170102/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:1156140/1‑68 (MQ=255) gTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGttt > 1:5889072/1‑68 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgcca > 1:27152652‑M2/1‑51 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt < 1:16453833/67‑1 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGt > 1:37361674/1‑67 (MQ=255) gcgcCTCGTGGGCATGAAACAGCATAAAGTACATGGCATTAAAGAGCGAGTGGGCGGCGGTTTTggg < 1:47004353/67‑2 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTtggcggcgtaagtgccatg > 1:54948294‑M2/1‑49 (MQ=255) gcCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTgggcggcgtaagtgccat > 1:21901200‑M2/1‑49 (MQ=255) cTCGTGGGCGTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:24804613/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTACAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:56370578/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:15842870/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:40382930/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:24539737/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:5063975/68‑1 (MQ=255) cTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:18898629/68‑1 (MQ=255) cTCGTGGGCATCAAACAGCATAAAGTTCATCACATTAAAGAGCGAGTtggcggcgtaagtgccatggt > 1:14800072‑M2/1‑47 (MQ=255) cTCGGGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCaa < 1:48673467/68‑1 (MQ=255) cGAGGGCATGAAACCGCATAAACTTCCTCTCATTAAAGAGCGAGTtggcggcgaaagtgccatggtac > 1:16842861‑M2/1‑45 (MQ=255) gTGGGCATGAAACCGCATACAGTTCATGTCCTTAAAGCGCGCGTgggcggcgtaagtgccatggtacc > 1:10569344‑M2/1‑44 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg < 1:47354805/68‑1 (MQ=255) gggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg < 1:43007554/68‑1 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:56965034/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:1040237/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:33664126/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:20487597/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:22670800/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:263950/1‑67 (MQ=255) ggCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAgg > 1:27931226/1‑67 (MQ=255) aTGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACa > 1:12686291/1‑67 (MQ=255) tGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATc < 1:39353543/68‑1 (MQ=255) aaaCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACAt > 1:29714684/1‑65 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:2941630/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:9473159/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:1010429/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:54004456/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCctgc < 1:3305612/68‑1 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:43596741/1‑66 (MQ=255) aCAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCct > 1:25763689/1‑66 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:31875508/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:30479708/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaa > 1:3890800/1‑68 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGga < 1:2342904/67‑1 (MQ=255) aTAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGCTTCCAAACAGGACATCCAGCTGgaa > 1:29047878/1‑68 (MQ=255) aaaGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGgaaga > 1:31543494/1‑68 (MQ=255) aGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGaagaag < 1:42386446/68‑1 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt > 1:39881260/1‑68 (MQ=255) gTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCGGGAAGAAgt > 1:25113716/1‑68 (MQ=255) gTTCATGTAATTAAAGAGCGAGTTGGCGGCGGTTTTTGTTCCAAACATGACATCCTTCTGGAAGAAgt > 1:17239351/1‑68 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtgt > 1:8574874/1‑68 (MQ=255) tCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgt < 1:6129331/66‑1 (MQ=255) tctCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:40918143/66‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:37770230/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:31321639/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg < 1:49585086/68‑1 (MQ=255) tGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgc > 1:18001836/1‑67 (MQ=255) gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAgtg < 1:44142959/63‑1 (MQ=255) gTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:52123265/1‑67 (MQ=255) tgaTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:36677994/3‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:4615567/1‑66 (MQ=255) tCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTgcg > 1:44973111/1‑66 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:131254/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:8154575/68‑1 (MQ=255) aTTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTg < 1:6936729/68‑1 (MQ=255) tAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTggg < 1:57647930/68‑1 (MQ=255) aaaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGc > 1:34117257/1‑68 (MQ=255) aaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa < 1:35174287/68‑1 (MQ=255) aaGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:30874212/1‑68 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGcc > 1:5181447/1‑66 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:21460277/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:13645428/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:34648099/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:28161451/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:28803875/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:3259194/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:41854882/1‑67 (MQ=255) agagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCa > 1:50317976/1‑67 (MQ=255) gagCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:23806758/1‑67 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:47937473/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:20972886/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:19784602/1‑66 (MQ=255) agCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCaa > 1:51235073/1‑66 (MQ=255) gCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAAc < 1:19322494/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:52578677/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:55982187/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:55587768/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:38243899/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCt < 1:54466019/66‑1 (MQ=255) gAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGc < 1:36107965/68‑1 (MQ=255) | TTACGCCGCCAGGTCGCGCGCCTCGTGGGCATGAAACAGCATAAAGTTCATGTCATTAAAGAGCGAGTTGGCGGCGGTTTTGGTTCCAAACAGGACATCCTGCTGGAAGAAGTGTGCGCCTGGGCAACCTGCGTG > CP009273/3015929‑3016063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |