| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4501871 = | 419 (0.600) | 34 (0.060) | 13/92 | NT | 5.6% | coding (361/957 nt) | fecD | iron‑dicitrate transporter subunit |
| ? | CP009273 | 4501966 = | 806 (1.400) | coding (266/957 nt) | fecD | iron‑dicitrate transporter subunit | |||||
Only 100 of 628 total aligned reads displayed.
ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 | ggcgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaacc < 1:31046662‑M1/2‑1 (MQ=255) gcgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCa < 1:2857949‑M1/3‑1 (MQ=255) gCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCa > 1:47542877/1‑68 (MQ=255) gCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCa > 1:1524624/1‑68 (MQ=255) cgggcgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCa > 1:7976562‑M1/65‑67 (MQ=255) cGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCAt < 1:21867983/67‑1 (MQ=255) cgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCATgcc > 1:41103500‑M1/61‑67 (MQ=255) cgtgctgatacaggggattgtgcgcaaccctctggcatcaccggatattctcggtgttaaCCATgcc > 1:51650748‑M1/61‑67 (MQ=255) gAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATgccg > 1:45111897/1‑67 (MQ=255) gcgcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCAAgccgcc < 1:4819220/67‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc > 1:34420408/1‑68 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccgc < 1:10802600/68‑1 (MQ=255) gcCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGccgcccg < 1:21577980/67‑1 (MQ=255) ccAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCa > 1:56459455/1‑68 (MQ=255) gCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAg > 1:20412102/1‑68 (MQ=255) acaggggattgtgcgcaaccctctggcatcaccggatattatcggtgttaaCCatgccgcacgcctg < 1:5907540‑M1/16‑4 (MQ=255) ttCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:57870537/67‑1 (MQ=255) ttCATCGGCTGGCGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAgg < 1:35516572/67‑1 (MQ=255) cATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCca < 1:24797133/68‑1 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:25993282/1‑68 (MQ=255) tCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagc > 1:49073992/1‑68 (MQ=255) cGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:13250832/1‑68 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:29287935/1‑67 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:29510698/1‑67 (MQ=255) ggCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCcagca > 1:38742296/1‑67 (MQ=255) tggtggGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCg < 1:12242566/67‑1 (MQ=255) ggTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgcagc > 1:39310053/1‑67 (MQ=255) ggTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGgcagc > 1:54737406/1‑67 (MQ=255) cTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCCGCAGCGGCAGCACCa > 1:3512650/1‑68 (MQ=255) tttGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCAt < 1:26672136/68‑1 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:45868900/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:51092799/1‑68 (MQ=255) ccAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACg > 1:11488786/1‑68 (MQ=255) cAGCATCTTCAGCAATCTCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACgg < 1:27454056/68‑1 (MQ=255) aGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACgg > 1:22228552/1‑67 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:20052166/1‑68 (MQ=255) cATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCa > 1:53731004/1‑68 (MQ=255) tCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGt < 1:24198608/68‑1 (MQ=255) cAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:23779148/68‑1 (MQ=255) cAGCAATATCAACCCCGCCAAGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACg < 1:46572926/68‑1 (MQ=255) atattctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCCGCGGCAGCACCATCACGGGCagtgccg < 1:37631384‑M1/51‑4 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:29915928/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:28993381/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:40546985/1‑68 (MQ=255) gCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGc > 1:16746542/1‑68 (MQ=255) cAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCa > 1:50096342/1‑68 (MQ=255) ttctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGCCGGCAt < 1:57360972‑M1/55‑1 (MQ=255) ttctcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt < 1:13671532‑M1/55‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACgg < 1:32170383/65‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACgg < 1:39820646/65‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:8592106/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt < 1:38162085/68‑1 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:10510131/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:12651856/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:3616738/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:18887072/1‑68 (MQ=255) aaTATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAt > 1:20981982/1‑68 (MQ=255) atatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCAGCACGGGCAGTGACGGCATa > 1:7203630/1‑68 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaa < 1:18265136/68‑1 (MQ=255) tatCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaa < 1:44328052/68‑1 (MQ=255) tcggtgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag < 1:75589‑M1/58‑1 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaag > 1:36639418/1‑68 (MQ=255) atCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCAGaag > 1:14489060/1‑68 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:3333207/68‑1 (MQ=255) tCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaaga < 1:50769699/68‑1 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa < 1:55877014/68‑1 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:25182979/1‑68 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:40095693/1‑68 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:5321950/1‑68 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:52445938/1‑68 (MQ=255) cAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaa > 1:19375394/1‑68 (MQ=255) aaCCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATaagaag < 1:24565294/68‑1 (MQ=255) tgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGt < 1:56765132‑M1/62‑1 (MQ=255) tgttaaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGt < 1:55319799‑M1/62‑1 (MQ=255) aCCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGt < 1:49726007/68‑1 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:43690705/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:54330737/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:52937726/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:21326794/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:22723553/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:2324413/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:42217562/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:46307371/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTa > 1:45447327/1‑68 (MQ=255) ccccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCAGCACGGGCAGGGACGGCATATGAAGTa > 1:42828251/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCCGCAGCGGCAGCCCCATCACGGGCAGTGACGGCATAAGAAGTag > 1:14732400/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:32761885/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:9338069/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:6648064/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:16037300/1‑68 (MQ=255) cccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTag > 1:30472585/1‑68 (MQ=255) ccGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTaga > 1:1563974/1‑68 (MQ=255) cGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag < 1:1005875/68‑1 (MQ=255) aaCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCCCCATCACGGGCAGTGACGGCATAAGAAGTaga < 1:8929081‑M1/65‑1 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAGGTagag > 1:27670376/1‑67 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag > 1:17113055/1‑67 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag > 1:47042801/1‑67 (MQ=255) gCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTagag > 1:47955173/1‑67 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:33718982‑M1/67‑1 (MQ=255) CCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGc < 1:37247631‑M1/67‑1 (MQ=255) | ACGCCGGTGAGCGCCAGCTTCATCGGCTGGTGGGTCTTTGCCAGCATCTTCAGCAATATCAACCCCGCCATGCCGCCCGCAAAGGCCAGCAGCGGCAGCACCATCACGGGCAGTGACGGCATAAGAAGTAGAGC > CP009273/4501804‑4501937 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |