| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 474 (0.680) | 41 (0.070) | 12/94 | NT | 10.0% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 339 (0.580) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 644 total aligned reads displayed.
ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 | aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:20509844‑M1/68‑68 (MQ=255)aaccgcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggta > 1:52237899‑M1/68‑68 (MQ=255) tACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTg > 1:37124953/1‑68 (MQ=255) gcgctactggaaaacgcagcgccgttcccgcgcccggattatctgtttgctgatatcgtcggtACTgg > 1:17555979‑M1/64‑68 (MQ=255) aCTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTgg < 1:6779635/68‑1 (MQ=255) cTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGc > 1:14595207/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:28793037/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:48821984/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:37769953/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:12880868/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:36490351/1‑68 (MQ=255) tGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCg > 1:4513106/1‑68 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGt < 1:41043600/67‑1 (MQ=255) agaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa > 1:44287779/1‑68 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:55800021/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:4938802/67‑1 (MQ=255) gaCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTa < 1:33259705/67‑1 (MQ=255) aCGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa > 1:32944334/1‑68 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCAGTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:54347009/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:42235211/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:22718074/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:22311347/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:10027083/67‑1 (MQ=255) cGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:19326422/67‑1 (MQ=255) cGCTACGGTTGCCGCGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGa < 1:53714910/67‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:39064724/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:29895159/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:30425866/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:42624854/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:354085/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:21291057/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:24709806/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:46174847/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:47426329/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:48092504/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:18084080/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:50493845/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:15611391/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:58069978/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:11731632/68‑1 (MQ=255) tACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAata < 1:10435926/68‑1 (MQ=255) aCGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAatat > 1:20936449/1‑68 (MQ=255) aCGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAatat > 1:8313855/1‑68 (MQ=255) ggTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTg < 1:25702828/68‑1 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:10311514/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:50810153/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:34315648/1‑68 (MQ=255) gTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGa > 1:26161467/1‑68 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:36021414/67‑1 (MQ=255) tGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt < 1:54132285/67‑1 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:53347363/1‑64 (MQ=255) cGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGAt > 1:40326359/1‑64 (MQ=255) gtgtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGt < 1:11341451/68‑1 (MQ=255) gtTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGtt < 1:9217439/67‑1 (MQ=255) cACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCg > 1:8756912/1‑67 (MQ=255) tttCACCCCACAGGCCGCGGCGACAAACGCACTCCCGGGACAAATAATGAAACAGTTGCTGCCGTCa > 1:29366855/1‑67 (MQ=255) tCAGCCCCCAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:13699431/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAACCGCACTGGCGGGAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:7175549/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCAcc > 1:31217634/1‑67 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:45542160/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:54969146/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:23021200/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:25359474/68‑1 (MQ=255) tCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCg < 1:26876860/68‑1 (MQ=255) gCCCCCAGGCCGCGGCGACAACCGCACTGGGGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCa > 1:37525995/1‑68 (MQ=255) gCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCa > 1:39496931/1‑68 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTATAAATATTGATACTGTTGCTGCCGTCACCGcc < 1:33811291/65‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:24387317/68‑1 (MQ=255) ccACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:52897705/68‑1 (MQ=255) caacaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt < 1:14221561/66‑1 (MQ=255) aaacaGGCCGCGGCGACAAACGCACAGGCGGTAGAAATATTGATACTGTTGCTGACGTCACCGCCAGt < 1:56329973/66‑1 (MQ=255) cacaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:31803192/1‑67 (MQ=255) cacaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGt > 1:13306655/1‑67 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCGGTCCCCGCCAGTAcc < 1:41780010‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCCCCGCCAGTAcc < 1:32372706‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:19640168‑M1/48‑1 (MQ=255) aGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:50045595/1‑68 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:15936793/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:47034538/1‑67 (MQ=255) ggCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcg > 1:25058066/1‑67 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:6182762/67‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:6591359/67‑1 (MQ=255) gcggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGat < 1:27366387/68‑1 (MQ=255) ggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGata < 1:5534778/67‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCa > 1:10778076/1‑68 (MQ=255) gACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAg < 1:7771991/68‑1 (MQ=255) tcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:15409542‑M1/60‑1 (MQ=255) cAAACGCACTGTCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:16340478/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:39366064/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:12034406/67‑1 (MQ=255) cAAAAGCACTGGCGGTAGAAATTTTGATACTGTTGCTGCCGTCACCTCCAGTACCGACGATATCAGCa < 1:9444461/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:57335478/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:56717340/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:51206840/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:16994407/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:48467482/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:24049282/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:43297450/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:27800077/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAg > 1:40755538/1‑68 (MQ=255) | ATTTACTGGAGACGCTACGGTTGCCGTGTTTCGCCACTTTCAGCCCACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAT > CP009273/1314696‑1314830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |