| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1314763 = | 474 (0.680) | 41 (0.070) | 12/94 | NT | 10.0% | coding (879/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase |
| ? | CP009273 | 1314808 = | 339 (0.580) | coding (834/1596 nt) | trpD | fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase | |||||
Only 100 of 588 total aligned reads displayed.
ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 | acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTa > 1:812573/1‑67 (MQ=255)acaGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAc < 1:10264550/68‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCCCCGCCAGTAcc < 1:32372706‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:37670648‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:42029945‑M1/48‑1 (MQ=255) tgtttgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:4957845‑M1/48‑1 (MQ=255) atgctgatatcgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgcccgtACcga < 1:15911633‑M2/5‑1 (MQ=255) tgctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgac < 1:16251226‑M1/51‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTAcc < 1:19438228/64‑1 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg > 1:15438171/1‑68 (MQ=255) ccGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcga < 1:24171365/66‑1 (MQ=255) gctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacga < 1:33510004‑M1/53‑1 (MQ=255) cgcgGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACcgacg < 1:20129423/67‑1 (MQ=255) gcggcgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGat > 1:30476568/1‑68 (MQ=255) ctgatatcgtcggtACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGat < 1:21800151‑M1/54‑1 (MQ=255) cgACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCa > 1:10778076/1‑68 (MQ=255) cgtcggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCa < 1:24704819‑M2/16‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGc < 1:12034406/67‑1 (MQ=255) cAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCa < 1:27656061/68‑1 (MQ=255) tcggtACTGGCGGGAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCaa < 1:56551707‑M1/62‑1 (MQ=255) ggtactggcggtgacggcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:39922317‑M2/20‑1 (MQ=255) ggtactggcggtgacggcagcaacagaatcaatatttctcccgccagtACCGACGATATCAGCAAACa < 1:38314624‑M2/20‑1 (MQ=255) ggtactggcggggaccgcagcaacagtatcaatatttctaccgccagtACCGACGATATCAGCAAACa < 1:41780010‑M2/20‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:39427970/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:25177448/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:48467482/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:55877035/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:57335478/68‑1 (MQ=255) cGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACa < 1:14001158/68‑1 (MQ=255) gCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAg > 1:40755538/1‑68 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGa > 1:21094552‑M1/1‑67 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:48098776‑M1/68‑1 (MQ=255) ACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGAt < 1:11304662‑M1/68‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATaa < 1:36056018‑M1/67‑1 (MQ=255) GGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATaa < 1:45666130‑M1/67‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:45166432‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:26003082‑M1/68‑1 (MQ=255) CGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATcc < 1:29127975‑M1/68‑1 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:34011614/1‑67 (MQ=255) gAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgc > 1:21961030/1‑67 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGgcg < 1:42256813/66‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:47088936/68‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:28248921/68‑1 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg > 1:43379831/1‑68 (MQ=255) aaTATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGcgcg < 1:46616542/68‑1 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:34408348/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:39207440/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:7304895/1‑68 (MQ=255) tatTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCggg > 1:7982205/1‑68 (MQ=255) atTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGat < 1:20531362/39‑1 (MQ=255) atTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGa > 1:53031678/1‑68 (MQ=255) aTACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACg > 1:32731975/1‑67 (MQ=255) tACTGTTTCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc < 1:53301990/68‑1 (MQ=255) tACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:35457085/1‑68 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGTCGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:48801089/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGGCGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:38610432/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGCCGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:29909154/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:9559377/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:58051623/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:54079356/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:13106828/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:54957623/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:17567887/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:44648736/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:24003727/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:26625481/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:41032478/1‑67 (MQ=255) aCTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:35047482/1‑67 (MQ=255) cTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:27304900/1‑66 (MQ=255) cTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGgc > 1:615897/1‑66 (MQ=255) gTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCt > 1:50553705/1‑67 (MQ=255) ttctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATGCGGGCGCGGGAACGGCGCTGc < 1:49361412/65‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:2941311/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:16413054/67‑1 (MQ=255) tgctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGc < 1:9307826/67‑1 (MQ=255) gctgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGt < 1:16975407/68‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGttt > 1:7010552/1‑68 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:31435683/67‑1 (MQ=255) tgcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtt < 1:40473576/67‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:8830735/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:37534900/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:1861061/68‑1 (MQ=255) gcCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt < 1:46349591/68‑1 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:553670/1‑67 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:43777400/1‑67 (MQ=255) ccGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGtttt > 1:34586983/1‑67 (MQ=255) ccgccagtACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGACCGGCGCGGCGTTTTCCAGTa > 1:42663360‑M2/9‑67 (MQ=255) ccagtACAGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAgcgc > 1:51792552‑M2/6‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATGCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:53632418‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:10426340‑M2/2‑68 (MQ=255) tACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:19112127‑M2/2‑68 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGcgcg > 1:54413681/1‑64 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCgg < 1:37019991/65‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:22403604/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:12166158/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGtt > 1:49895738/1‑67 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:36693526/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:23124265/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:56960333/66‑1 (MQ=255) aCCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGt < 1:14919551/66‑1 (MQ=255) | ACAGGCCGCGGCGACAAACGCACTGGCGGTAGAAATATTGATACTGTTGCTGCCGTCACCGCCAGTACCGACGATATCAGCAAACAGATAATCCGGGCGCGGGAACGGCGCTGCGTTTTCCAGTAGCGCGGTT > CP009273/1314742‑1314874 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |