| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 524 (0.750) | 59 (0.110) | 22/84 | NT | 13.3% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 374 (0.710) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 652 total aligned reads displayed.
CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGC > CP009273/3630146‑3630279 | cAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggt < 1:33201183‑M1/68‑5 (MQ=255) cAGCACCTGTAACTCTCCGAGCAAGGGTTTATGCAGAGTCAAGGGCACCAGACCCGCGCGGGTCtggt < 1:38738092‑M1/68‑5 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGGGAATGGCACCAGCCCCGCGCGGGTCgggtgcca < 1:32372632‑M1/68‑9 (MQ=255) aCCTGAAACCCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:38052956‑M1/68‑9 (MQ=255) aaCTCTACGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcac < 1:51010812‑M1/67‑14 (MQ=255) aCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:41025275/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:22830105/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:23401150/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:37168539/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:424514/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:8461986/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:10028807/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTAGGCAGCACGTTGAgg > 1:55842128/1‑67 (MQ=255) ctctTCGAGCAACGGTTTAGGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:49601234/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:46070603/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:47383960/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:37758070/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:8917054/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:40285887‑M1/68‑19 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgca < 1:17012637‑M1/68‑20 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:9550637/1‑68 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:25414169/1‑68 (MQ=255) gAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAAtt > 1:103305/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:21026983/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:28086205/1‑68 (MQ=255) aTGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCt < 1:31084249/68‑1 (MQ=255) aTGCACAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcga < 1:19150592‑M1/68‑35 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:33719208/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:38534766/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:53464742/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:39152565/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:19379809/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:31743587/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:45422501/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:46908365/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:2863866/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:14027702/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:51331671/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:5197185/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:54120499/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:30081213/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:17356670/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:23784807/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:32839907/1‑68 (MQ=255) agagTGAAGGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaaga < 1:54705865‑M1/67‑38 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:21290852/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:37626003/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:57467919/1‑68 (MQ=255) gAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCac > 1:13098819/1‑67 (MQ=255) gAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCaa > 1:41747897/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:54341692‑M1/1‑22 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCGGCCCGTTGCGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:7480552/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:48072242/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:55451657/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:10624127/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:26832193/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:34148985/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:20554779/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:36476112/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:56665594/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:6417556/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:705429/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:42764098/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAAAGGc > 1:57169802/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctg > 1:17976735‑M1/1‑18 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:10986760/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:24650768/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:35219998/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:46788783/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:1424580/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:27501551/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:36740496/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGa < 1:20143577/68‑1 (MQ=255) aCCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgg > 1:29888001‑M1/1‑13 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:18609085/1‑67 (MQ=255) aCCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGAcgcg > 1:4881807/1‑67 (MQ=255) ccccCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc < 1:50227365‑M1/68‑57 (MQ=255) cccGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggc < 1:42289370‑M1/68‑57 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAAACGGCGACgcgc > 1:29249373/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATACCCAAACGGCGACgcgc > 1:26054397/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAACCGGCGACgcgc > 1:12416617/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGCCgcgc > 1:43949395/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc < 1:22529457/67‑1 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:44740545/1‑67 (MQ=255) cccGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACgcgc > 1:15428627/1‑67 (MQ=255) cgcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAg > 1:19731462/1‑67 (MQ=255) cgcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAg > 1:3067470/1‑67 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:15864807‑M1/1‑7 (MQ=255) gcgGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggc > 1:4661496‑M1/1‑7 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGCCGCGCCCAGc > 1:14910167/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc > 1:52488236/1‑67 (MQ=255) gcgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGc < 1:34727656/67‑1 (MQ=255) cgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGcc > 1:25055598/1‑67 (MQ=255) cgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGcc > 1:7925473/1‑67 (MQ=255) cgGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGcc > 1:11551073/1‑67 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg > 1:58090919‑M1/1‑2 (MQ=255) tCtggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg < 1:21876531‑M1/67‑66 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:43322212/67‑1 (MQ=255) tCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCgg < 1:16253511/67‑1 (MQ=255) ctggtgccattcactctgcataaaccgttgctcgaagagttacaggtgctggcgggcgtggcggtg > 1:24139557‑M1/1‑1 (MQ=255) | CCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGCGCCCAGCCCCGGC > CP009273/3630146‑3630279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |