| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3630213 | 524 (0.750) | 59 (0.110) | 22/84 | NT | 13.3% | coding (558/1203 nt) | yhiN | putative oxidoreductase |
| ? | CP009273 | = 3630199 | 374 (0.710) | coding (572/1203 nt) | yhiN | putative oxidoreductase | |||||
Only 100 of 681 total aligned reads displayed.
AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGC > CP009273/3630132‑3630266 | aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGCGCAACGGGTTATGCAGAGTGAATGGCACCa > 1:19807039/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:10771213/1‑68 (MQ=255)aGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCa > 1:52718524/1‑68 (MQ=255) gCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAg < 1:23170795‑M2/67‑2 (MQ=255) ccGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCCCCAgaccc < 1:14938823‑M2/68‑6 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC > 1:19181253‑M1/1‑68 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC > 1:7128693‑M1/1‑68 (MQ=255) gCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC < 1:50808763‑M1/68‑1 (MQ=255) ccACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgc < 1:24247917‑M2/67‑8 (MQ=255) ccACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGC > 1:48464781‑M1/1‑67 (MQ=255) aCGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCG < 1:40572940‑M1/68‑1 (MQ=255) gcccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGG > 1:15618317‑M1/1‑68 (MQ=255) ccgccAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggt > 1:29888001‑M2/1‑54 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgcagc > 1:24921409/1‑68 (MQ=255) gCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGgcagc > 1:27389282/1‑68 (MQ=255) aCCTGTACCTCTTCGACCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgcca > 1:6134666‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGCGTGAATGGCACCAGACCCGCGCGGGTCtggtgcca < 1:18237888‑M1/68‑9 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgcca > 1:54341692‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgc > 1:55727294‑M2/1‑46 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgc < 1:2169413‑M1/66‑7 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCCGCAc > 1:20692378/1‑68 (MQ=255) aCCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCCCGGGTCGGCAGCAc > 1:54924829/1‑68 (MQ=255) ccTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGCCACCAgacccgcgcgggtctggtgccat > 1:17737608‑M2/1‑45 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:36634362/1‑68 (MQ=255) tAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGa > 1:46427260/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:46801171/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAg > 1:11299229/1‑68 (MQ=255) aaCTCTTCGAGCAACGGTTTATGCAGAGTGAAAGGCACCAGACCCGCGCGGGTCtggtgccattcac < 1:36845414‑M1/67‑14 (MQ=255) aaCTCTTCGAGCAACGGTTTAAGCAGAGTTAATGGCACCAGACACGCGCCGGTCGGCAGCCCGTTGAg > 1:31104687/1‑68 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:37168539/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:424514/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:10028807/1‑67 (MQ=255) ctctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAgg > 1:8461910/1‑67 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:3431554/1‑68 (MQ=255) tctTCGAGCAACGGTTTATGCAGAGAGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGcc > 1:45300150/1‑68 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgc > 1:13447313‑M2/1‑36 (MQ=255) ctTCGAGCAACGGTTTATGCAGAGTGAATGCCACCAGACCCGCGCGGGTCtggtgccattcactctgc < 1:46650030‑M1/68‑19 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgca < 1:17012637‑M1/68‑20 (MQ=255) ttCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCaa > 1:25414169/1‑68 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattccctctgcataa < 1:23547350‑M2/67‑37 (MQ=255) aGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTg > 1:56796714/1‑68 (MQ=255) gCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:45724537/1‑68 (MQ=255) gCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGt > 1:3786784/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCCGACCCCCGCGGGACGGCCGCACTTTGCGGCCAAATtttt > 1:32871094/1‑68 (MQ=255) cAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGtt > 1:20257187/1‑68 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc > 1:34842261/1‑68 (MQ=255) ggTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGc < 1:43399382/68‑1 (MQ=255) ttATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCaa > 1:27893140/1‑67 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:17321608/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:53464742/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:39152565/1‑68 (MQ=255) tGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCtt > 1:5787206/1‑68 (MQ=255) gCAGAGTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaag < 1:38137706‑M2/68‑51 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:44224990/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:38828124/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:12097791/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:4021402/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:1270027/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:14154525/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:33360126/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:19379809/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:22085361/1‑68 (MQ=255) gCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTta > 1:54142972/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:47396100/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:4224975/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:41496829/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:37691298/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:33994875/1‑68 (MQ=255) cAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTtat > 1:21092665/1‑68 (MQ=255) agagTGAAGGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaaga < 1:54705865‑M1/67‑38 (MQ=255) gTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagtt < 1:29502608‑M2/67‑55 (MQ=255) gTGAATGGCACCAgacccgcgcgggtctggtgccattcactctgcataaaccgttgctcgaagagtt < 1:26311400‑M2/67‑55 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagtt > 1:51436720‑M1/1‑27 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:52079313/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:31817794/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:56071853/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:38631544/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:30817462/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAAcc > 1:28526581/1‑68 (MQ=255) gTGAATGGCACCAGACCCGCGCGGGTCGCCAGCACGTTGAGGCCAAATTGTTCCGCAATCTTATAAcc > 1:49512187/1‑68 (MQ=255) tGGCACCCgacccgcgcggggctggtgccattccctctgcataaaccgttgctcgaagagttacaggt < 1:32372632‑M2/68‑61 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:57372774/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:30160392/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:742427/1‑68 (MQ=255) tGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACg > 1:10347473/1‑68 (MQ=255) gggcCCCAGCCCCCCGCGGGGCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt < 1:2887746‑M1/67‑47 (MQ=255) gCACCAGACCCGCGCGGGTCtggtgccattcactctgcataaaccgttgctcgaagagttacaggt > 1:9606955‑M1/1‑20 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:51143582/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:47138154/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:42764098/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:22731456/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:15902522/1‑68 (MQ=255) gCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGc > 1:892010/1‑68 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:50202372/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:35735242/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:18858432/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:16399875/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:7682855/1‑67 (MQ=255) aCCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCg > 1:1424580/1‑67 (MQ=255) aCCAGACACGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAACCGGCg > 1:23992357/1‑67 (MQ=255) | AGGCACCGCCACGCCCGCCAGCACCTGTAACTCTTCGAGCAACGGTTTATGCAGAGTGAATGGCACCAGACCCGCGCGGGTCGGCAGCACGTTGAGGCCAAATTGTTCGGCAATCTTATAACCAAACGGCGACGC > CP009273/3630132‑3630266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |