| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 64557 | 549 (0.780) | 47 (0.080) | 13/94 | NT | 8.2% | coding (1224/2352 nt) | polB | DNA polymerase II |
| ? | CP009273 | = 64577 | 591 (1.010) | coding (1204/2352 nt) | polB | DNA polymerase II | |||||
Only 100 of 915 total aligned reads displayed.
TACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTCGC > CP009273/64510‑64644 | aCAGGCTTTTATAGTCCAGCACCAGCACTGATTCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc < 1:7619407/67‑1 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAgcc > 1:23849856/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCg > 1:27133981‑M2/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCg > 1:5378671‑M2/1‑67 (MQ=255) aCAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCAAGGACGTGAATCAATCACGTAgcc > 1:28062471/1‑67 (MQ=255) gCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccag < 1:4239940‑M2/68‑6 (MQ=255) gCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccag < 1:11441327‑M2/68‑6 (MQ=255) gCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccag < 1:13187427‑M2/68‑6 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:24334024‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:52334937‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg < 1:18550165‑M2/68‑7 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgc > 1:35048677‑M2/1‑62 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgc > 1:57086459‑M2/1‑62 (MQ=255) cTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCAATCAAGTAGCCgccacg < 1:45465608‑M2/68‑7 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:10460910‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:43746762‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:57519770‑M2/1‑61 (MQ=255) ttttATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagg > 1:16061010‑M2/1‑61 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTgg < 1:16383384/68‑1 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:39951069/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:26052156/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:15601191/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTg > 1:27584783/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATACATCACGTAGCCGCCAGGGCTg > 1:44315146/1‑67 (MQ=255) ataGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGGGAATCCATCACGTAGCCGCCAGGGCTgg < 1:37109756/68‑1 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:51364778/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:1066947/1‑68 (MQ=255) aGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCg > 1:33935926/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgat > 1:39546378‑M2/1‑52 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:36300532/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:30627482/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:42646061/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:34440210/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:14405335/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:50948722/1‑68 (MQ=255) ccagcaccagcaCTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgc > 1:1952875/1‑68 (MQ=255) cagcaccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcg < 1:49654705/68‑1 (MQ=255) cagcaccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcg < 1:20644279/68‑1 (MQ=255) accagcacTGAATCATAAAGCCTTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:37993097/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATTACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:31811464/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:21691761/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggcg > 1:17449924/1‑67 (MQ=255) accagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTgcggc < 1:17929623/66‑1 (MQ=255) ccagcacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgattcagtg > 1:5779525‑M2/1‑46 (MQ=255) cacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACt > 1:25694423/1‑67 (MQ=255) cacTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACt > 1:55678420/1‑67 (MQ=255) acTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgattcagtgctggt > 1:36559792‑M2/1‑41 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCgccagggctttatgattcagtgctggtgctgg > 1:8865656‑M2/1‑36 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:8491974/1‑68 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga > 1:51847815/1‑68 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCga < 1:13769667/68‑1 (MQ=255) aTCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGAGGTGCTTCGCCga > 1:56549001/1‑68 (MQ=255) cATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCgaga < 1:50572832/68‑1 (MQ=255) aaaaagcCCTGGCCGTGAACCCATCCCGTCGCCgccagggctttatgattcagtgctggtgctggact > 1:40922428‑M2/3‑33 (MQ=255) aTAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGAt > 1:55119631/1‑68 (MQ=255) aTAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGAt > 1:58087564/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCCCTTCGCCGAGATTa > 1:38507015/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:22862024/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:14797256/1‑68 (MQ=255) aaaGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTa > 1:3905879/1‑68 (MQ=255) gCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:35641671/1‑68 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:6056898/1‑67 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:50140341/1‑67 (MQ=255) cccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgc > 1:21138326/1‑67 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTGGCCGAGATTAGgcgc > 1:10019713/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:54411981/1‑68 (MQ=255) ccTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGgcgc > 1:46543642/1‑68 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:2863279/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:53216599/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:45811488/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:5293620/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:47175091/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:1700580/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:32439453/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:25024973/68‑1 (MQ=255) tGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGa < 1:22438046/68‑1 (MQ=255) gCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGcgcgt < 1:31147252/66‑2 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:2009217/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:12057524/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:8087110/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:48604959/1‑68 (MQ=255) ccGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACAt > 1:36772343/1‑68 (MQ=255) cGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTATGCGCGACATa < 1:32180551/68‑1 (MQ=255) cGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATa > 1:3268810/1‑68 (MQ=255) gTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATaa < 1:12599934/68‑1 (MQ=255) aacccaacccGTCGCCgccagggctttatgattcagtgctggggctggactataaaagcctgtacccg > 1:6509377‑M2/1‑16 (MQ=255) aaTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:4781035/1‑68 (MQ=255) aaTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:33584183/1‑68 (MQ=255) aaTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:41290546/1‑68 (MQ=255) aaTCCATCACGTAGCCGCCAGGGCTGGCGTGCCGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:4328983/1‑68 (MQ=255) aTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:30217473/1‑67 (MQ=255) aTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:40562350/1‑67 (MQ=255) aTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:44926760/1‑67 (MQ=255) aTCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCa > 1:2647756/1‑67 (MQ=255) tCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGa < 1:42935001/68‑1 (MQ=255) aCGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGAt > 1:46259489/1‑67 (MQ=255) gTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCa > 1:3319178/1‑68 (MQ=255) gccgccAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGCTGCAGTc > 1:29393689/1‑68 (MQ=255) gccgccAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTc > 1:41699961/1‑68 (MQ=255) cgccAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTcgc < 1:49219657/68‑1 (MQ=255) | TACAGGCTTTTATAGTCCAGCACCAGCACTGAATCATAAAGCCCTGGCCGTGAATCCATCACGTAGCCGCCAGGGCTGGCGTGCGGCGGCACTTCGCCGAGATTAGGCGCGACATAACCAGCGCGATGCATTCGC > CP009273/64510‑64644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |