| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3471236 | 340 (0.550) | 21 (0.040) | 7/86 | NT | 6.6% | intergenic (+19/+30) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| ? | CP009273 | = 3471237 | 330 (0.690) | intergenic (+20/+29) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) | |||||
Only 100 of 153 total aligned reads displayed.
AGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3471157‑3471236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaagcggggaATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGTTC < CP009273/3471237‑3471172 AGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAA > 1:13987898/1‑68AGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAA > 1:14047450/1‑68AGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACAGTATTGAGGCGTAA > 1:40291025/1‑68 GCCAGCCAGCCGTCGATCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:39723222/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:24912622/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:18083138/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:45595250/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:33967177/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:3068984/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:34783483/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:29580601/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:22006111/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:23154337/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:46266409/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:40004365/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:38635288/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:27057389/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:38023457/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:28116131/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:14615526/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:10576588/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:6837264/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:6342644/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:12282202/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:12284055/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:1265798/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:14363672/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:5677381/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:17363157/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:14972651/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:3127212/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:15557961/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:48631527/1‑68 GCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA > 1:47307782/1‑68 CAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAA < 1:17061098/68‑1 CAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAA < 1:35491484/66‑1 GCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAA > 1:4241632/1‑68 CCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAA > 1:22086691/1‑67 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAG < 1:35051098/67‑1 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAG < 1:32736751/67‑1 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAG < 1:28631871/67‑1 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAG < 1:40524188/67‑1 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAA < 1:25634428/66‑1 CAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAA < 1:21349239/66‑1 GCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGG > 1:45235342/1‑68 CGTCGAACATCGCGTCGCAGGCTGAAGAACCGCCCCCGCCACATTATTGAGGCGTAAAAAAAGCGGGG > 1:38566043/1‑68 CGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGG < 1:40578518/68‑1 CGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGG > 1:49546105/1‑68 CGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGG < 1:8954749/68‑1 CGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCG < 1:18195178/65‑1 GAAACGCCACCGCCACATTATTGCGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTTCGGCTCAAT > 1:5959262/1‑68 GAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGGTTTTTTTACGCCTCAAT > 1:37929016/1‑68 GAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGGTTTTTTTACGCCGCAAT > 1:10371828/1‑68 GAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAAT > 1:35966247/1‑68 CGCCACCGCCACATTATTGAGGCGTTAAAAAAGCGGGGAATCCCCGCTTTTTTTACGGCGCAATAATG > 1:43570480/1‑68 CGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATG > 1:7509921/1‑68 GCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGT > 1:45747793/1‑68 GCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGT > 1:33979415/1‑68 GCCACATTATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCGTTTTTTACGCCTCAATAATGTGGCGGT > 1:11929141/1‑68 ATTGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTT > 1:37577548/1‑66 TGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATTATGTGGCGGTGGCGTTTCTT > 1:31660363/1‑68 TGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCT > 1:25597467/1‑67 TGAGGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGGTTCT > 1:15502815/1‑67 GGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCA > 1:14546677/1‑67 GGCGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCA > 1:21056596/1‑67 CGTAAAAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAG > 1:37184746/1‑66 AAAAAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCG > 1:44909295/1‑67 AAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGC > 1:32955787/1‑68 AAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGC > 1:31051456/1‑68 AAGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGC > 1:48086432/1‑68 AGCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCG > 1:47072412/1‑68 GCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGA > 1:31733979/1‑68 GCGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGA > 1:4867573/1‑68 CGGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAg > 1:46516954/1‑67 GGGGAATCCCCGCTTTTTTTACGCCTCAATATTGTGGCGGTGGCGTTTCTTCTGCCTGCGACGCGAT < 1:3058516/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATG > 1:238616/1‑68 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATG > 1:25407900/1‑68 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:7412991/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:32654673/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:11741425/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:20154992/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:19827880/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:28845002/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:35618054/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:26719162/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:2527496/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:41613691/67‑1 GGGGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAT < 1:20570765/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:29144604/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:41257449/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:15558005/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:20570172/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:46982740/67‑1 GGAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:46645934/67‑1 GGAATCCCCGCTTTTTTTACCCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGT < 1:36886186/67‑1 GGAATCCCCGCTTTGTTTACGCCTCAATAATGTGGCGGGGGCGGTTCTTCAGCCTGCGACGCGATGT < 1:46702188/67‑1 GAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGCCGCGATGTTC > 1:48233250/1‑68 GAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGTT < 1:49213320/67‑1 GAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGTT < 1:15919133/67‑1 GAATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGAGGTT < 1:27924427/67‑1 AGCCAGCCAGCCGTCGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/3471157‑3471236‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaagcggggaATCCCCGCTTTTTTTACGCCTCAATAATGTGGCGGTGGCGTTTCTTCAGCCTGCGACGCGATGTTC < CP009273/3471237‑3471172 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |