| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3471236 | 340 (0.550) | 21 (0.040) | 7/86 | NT | 6.6% | intergenic (+19/+30) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) |
| ? | CP009273 | = 3471237 | 330 (0.690) | intergenic (+20/+29) | slyX/slyD | phi X174 lysis protein/FKBP‑type peptidyl prolyl cis‑trans isomerase (rotamase) | |||||
Only 100 of 506 total aligned reads displayed.
CGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACA > CP009273/3471171‑3471304 | cGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGAt < 1:49960687/67‑1 (MQ=255) aaCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtc < 1:49213320‑M2/67‑3 (MQ=255) aCATCGCGTCGCAGGCTGAAGAACCGCCCCCGCCACATTATTGAGGCGTAAACAAAGCGGGGATtcc < 1:46702188‑M2/67‑4 (MQ=255) aCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcc > 1:40831210‑M2/1‑64 (MQ=255) aCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcc < 1:14836290‑M2/67‑4 (MQ=255) aCATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcc < 1:15558005‑M2/67‑4 (MQ=255) ctcGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtccccg > 1:46516954‑M2/2‑62 (MQ=255) aTCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcccc < 1:33912807‑M2/67‑6 (MQ=255) aTCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcccc < 1:30058515‑M2/67‑6 (MQ=255) aTCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtcccc < 1:7412991‑M2/67‑6 (MQ=255) gcgTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtccccgctt > 1:48086432‑M2/1‑59 (MQ=255) gCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTg > 1:19784905/1‑68 (MQ=255) gCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTg > 1:30442470/1‑68 (MQ=255) cTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACt > 1:26883510/1‑68 (MQ=255) cTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACt > 1:50700581/1‑68 (MQ=255) tGACGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATtccccgctttttttacgcc > 1:14483500‑M2/1‑48 (MQ=255) tGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACt < 1:13811593/67‑1 (MQ=255) tGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACt < 1:28821118/67‑1 (MQ=255) gaagaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACttt < 1:42270640/68‑1 (MQ=255) gaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTc > 1:5556569/1‑68 (MQ=255) gaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTc > 1:23082249/1‑68 (MQ=255) gaaACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTc > 1:12376680/1‑68 (MQ=255) aaCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCgg > 1:22100270/1‑68 (MQ=255) aaCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCg < 1:7947999/67‑1 (MQ=255) aCGCCACCGCCACATTCTTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGt < 1:46172310/68‑1 (MQ=255) aCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGt < 1:27889786/68‑1 (MQ=255) aCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGt < 1:3649251/68‑1 (MQ=255) aCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGt < 1:3926300/68‑1 (MQ=255) aCGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGt < 1:37629390/68‑1 (MQ=255) cgccacctccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTa < 1:10175978/68‑1 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCAGTTTTTCGGTa > 1:34467480/1‑68 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTa > 1:20315738/1‑68 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTa < 1:11121008/68‑1 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTa > 1:43963234/1‑68 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTa > 1:29332686/1‑68 (MQ=255) cgccaccgccacATTATTGAGGCGTAAAAAAAGAGGGGATTCAACGCTTTTTTGTAACTTTTTCGGTa > 1:31373709/1‑68 (MQ=255) gccaccgccagATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTAt < 1:4873812/68‑1 (MQ=255) gccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTAt < 1:23969349/68‑1 (MQ=255) ccaccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTAtt > 1:36707942/1‑68 (MQ=255) caccgccacATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTAtt < 1:35685227/67‑1 (MQ=255) ctaataccgaaaaagtgacAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTg < 1:20691470‑M1/48‑1 (MQ=255) cacaTTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgca > 1:8994128/1‑68 (MQ=255) attattGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaacc > 1:45297765/1‑68 (MQ=255) ttattGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccg < 1:24536375/68‑1 (MQ=255) ttattGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaacc > 1:7275395/1‑67 (MQ=255) ttaatGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTATTTCGGTATTAGTGgcaaccg < 1:41574237/68‑1 (MQ=255) tattGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgc > 1:34935311/1‑68 (MQ=255) attGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgca > 1:32950489/1‑68 (MQ=255) attGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgca > 1:13323756/1‑68 (MQ=255) attGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTATTCGGTATTAGTGgcaaccgca > 1:47154608/1‑68 (MQ=255) tGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaa > 1:36008050/1‑67 (MQ=255) tGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaa > 1:26467104/1‑67 (MQ=255) tGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaa > 1:33201352/1‑67 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:1003581/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:23556551/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:41417133/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:18148426/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:44948130/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:20471716/1‑68 (MQ=255) gAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGgcaaccgcaacc > 1:25418118/1‑68 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:6125832/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:41060724/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:43512038/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:4847035/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:40308602/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:942569/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:11846857/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:21418942/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:16776991/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:21004186/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:38169311/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:32146877/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:35257236/1‑67 (MQ=255) ggCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGcaaccgcaaccg > 1:36207673/1‑67 (MQ=255) gCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCTGTATTAGTGGCaaccgcaaccgc < 1:16056318/67‑1 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCAGTTTTTCGGTATTAGTGGCAACCGCAAccgccg > 1:25129726/1‑68 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgccg > 1:36921316/1‑68 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgccg > 1:28444586/1‑68 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgccg > 1:173793/1‑68 (MQ=255) cGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAAccgcc < 1:19099251/67‑1 (MQ=255) AAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGc > 1:37119648‑M1/1‑68 (MQ=255) AAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGc > 1:49678603‑M1/1‑68 (MQ=255) AAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGc > 1:20024266‑M1/1‑68 (MQ=255) AAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGc > 1:29889105‑M1/1‑68 (MQ=255) AAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGcc > 1:39831089‑M1/1‑68 (MQ=255) AAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCt < 1:28583044‑M1/68‑1 (MQ=255) AAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCtt > 1:105705‑M1/1‑68 (MQ=255) AAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCtt > 1:30833446‑M1/1‑68 (MQ=255) AAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCttt < 1:31695288‑M1/68‑1 (MQ=255) AGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCttt < 1:8539051‑M1/67‑1 (MQ=255) AGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTa > 1:15342385‑M1/1‑68 (MQ=255) GGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTAcc > 1:50915304‑M1/1‑67 (MQ=255) GGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCg > 1:2269180‑M1/1‑68 (MQ=255) GATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGcc > 1:47510302‑M1/1‑67 (MQ=255) GATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGcc > 1:18705456‑M1/1‑67 (MQ=255) GATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGcc > 1:1761519‑M1/1‑67 (MQ=255) GATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGcc < 1:25888560‑M1/67‑1 (MQ=255) GATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGcc > 1:15832247‑M1/1‑67 (MQ=255) ATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCcac < 1:27578080‑M1/68‑1 (MQ=255) ttCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCcaca < 1:19505532/68‑1 (MQ=255) | CGAACATCGCGTCGCAGGCTGAAGAAACGCCACCGCCACATTATTGAGGCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCACTTTTTCGGTATTAGTGGCAACCGCAACCGCCGTTGCCTTTACCGCCACA > CP009273/3471171‑3471304 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |