| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 253 | 549 (0.890) | 29 (0.060) | 12/92 | NT | 5.2% | coding (64/66 nt) | thrL | thr operon leader peptide |
| ? | CP009273 | = 278 | 597 (1.170) | intergenic (+23/‑59) | thrL/thrA | thr operon leader peptide/Bifunctional aspartokinase/homoserine dehydrogenase 1 | |||||
Only 100 of 528 total aligned reads displayed.
GTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/177‑253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgggctTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGGTA < CP009273/278‑213 GTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACG > 1:45605211/1‑68 actCAACATCCATGAATCGCTTTTGCACCACCATTACCTCCACCATCACCATTACCACAGGTAAGGG < 1:33805783/64‑1 ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGT < 1:25525461/68‑1 ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGT > 1:47814062/1‑68 ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGG < 1:43492918/67‑1 ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGG < 1:5774497/67‑1 ACACAACATACATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGT < 1:7893636/68‑1 CACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCGTTACCTGTGGTAATGGTG < 1:42888346/68‑1 ACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCCCAGGTAACGGTGC > 1:50848548/1‑68 ACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGC < 1:8366040/68‑1 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:26396716/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:2010459/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:45968165/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:39628962/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:15373428/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:7134251/1‑68 CAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCG > 1:12409472/1‑68 AACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG < 1:17750420/68‑1 ACATCCATGAAACGCATTAGCACCACCATTAGCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:42174806/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCCCCACCATCACCATTACCACACGTAACGGTGCGG > 1:24546527/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCATAGGTAACGGTGCGG > 1:34497912/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTTACGGTGCGG > 1:15950301/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCtg > 1:10102135/1‑65 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:23353110/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:23073486/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:38294878/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:37246832/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:36583100/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:35106576/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:28425400/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:4673351/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:47181197/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:16730379/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:16039247/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:30141452/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:30686375/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGAGG > 1:28782087/1‑67 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACG > 1:22421661/1‑61 ACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACG > 1:40188709/1‑61 ACATCCATGAAACGCATTAGCACCACCAATACCACCACCATCACCATTACCACACGAAACGCTGCGG > 1:43972208/1‑67 ATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCT < 1:19035749/68‑1 ATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGG > 1:8761133/1‑65 TCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTc > 1:10670118/1‑67 ccgCCATCACCATTACCACAGGTAACGGTGCGGGCGTTTTTGTGTGTTTCCTGTACGCGTCAGCCCG > 1:6584240/4‑67 CCATCACCATTACCACAGGTAACGGTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACC > 1:35942567/1‑68 CACCATTACCACAGGTAACGGTGCGGGCTTTTTTCTGTGGTTCCTGTACGCGTCAGCCCGCACCGTT > 1:21535540/1‑67 ACCACAGGTAACGGTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCGGTGG > 1:9392137/1‑68 CACAGGTAACGGTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTA > 1:44211939/1‑68 CACAGGTAACGGTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTA > 1:48588738/1‑68 AGGTAACGGTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATG > 1:31633348/1‑68 GTGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT > 1:19456199/1‑68 aGCGGGCTTTTTTCTTTGTTTCCTGTACGCGTCAGCCCGCACCGTTACGTGTGGTAATGGTGATG < 1:51186817/64‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT < 1:24356602/67‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT < 1:29236071/67‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT < 1:35441249/67‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT < 1:1470356/67‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGT < 1:25736172/67‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGG < 1:18405769/66‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATG < 1:13959186/65‑1 TGCGGGCTTTTTTCTGTGTTTCCTGTACGCGGCAGCCCGCACCGTTACCTGTGGTAATGGTGATG < 1:9763631/65‑1 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATTGTGATGGTGG > 1:46289108/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:50210141/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:15265697/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:17323854/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:12827926/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:12001072/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:18812606/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:4487176/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:20882318/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:32562126/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:26994445/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:2398134/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:26575928/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGG > 1:38687503/1‑68 GCGGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTG < 1:11265453/67‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:49336477/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:32105409/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:13336067/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:27962326/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:6276356/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:50382907/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:41962322/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:37674348/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:29610183/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:22128860/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:21888839/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:2048489/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:39137916/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:1851143/68‑1 GGGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:25229460/68‑1 GGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG > 1:41093573/1‑68 GGCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTG < 1:21330753/67‑1 GCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG < 1:40635798/67‑1 GCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG < 1:48220931/67‑1 GCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG < 1:25391978/67‑1 GCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG < 1:7482000/67‑1 GCTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGG < 1:3276255/67‑1 CTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGGTA > 1:14240715/1‑68 CTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGGTA > 1:1141468/1‑68 CTTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGGTA > 1:49763900/1‑68 GTACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/177‑253‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgcgggctTTTTTCTGTGTTTCCTGTACGCGTCAGCCCGCACCGTTACCTGTGGTAATGGTGATGGTGGTGGTA < CP009273/278‑213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |