| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4061067 = | 600 (0.970) | 57 (0.110) | 16/94 | NT | 11.4% | coding (1570/2037 nt) | yihQ | alpha‑glucosidase |
| ? | CP009273 | 4061094 = | 381 (0.730) | coding (1543/2037 nt) | yihQ | alpha‑glucosidase | |||||
Only 100 of 342 total aligned reads displayed.
GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 GGCCTGCACCACAGCGTGATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:14721361/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:30245673/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:31728541/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:21427807/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:50974710/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:894049/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:43955186/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:47322684/68‑1GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT < 1:47785763/68‑1 GCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:35149941/1‑67 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGa > 1:46019425/1‑67 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:27673754/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:27511805/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:24312094/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:7691883/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:30587525/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:2093419/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:31068580/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:6661737/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:18414742/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:8162389/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:32492328/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:36981738/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:37928592/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:14007924/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:40585193/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:12477687/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:48065969/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGATGCT > 1:10547176/1‑66 CCTGCACCACAGCGACATTGGCGGTTACACCAACCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCT > 1:23638480/1‑66 CCTGCACCACAGCGACATTGGCGGGTACACAACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGa > 1:42894001/1‑67 CCTGCAAAACAGCGACATTGGCGGATACACCACACTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGa > 1:46587016/1‑67 GCACCACAGCGACATTGGGGGTTACACCACCCTGTTTGAGATGACGCGCAGCAAAGAGCTGCTGCTGC < 1:23962250/68‑1 GCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC < 1:35650122/68‑1 GCACCACAGCGACATTGGCGGGTTCACCACGCTGTTTGAGATCAAGCGCTGCTAAGAGCTGCTGCTGC < 1:5330474/68‑1 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:7242915/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:49356986/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:41569037/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:9295584/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:38478541/1‑66 ACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:29304202/1‑66 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT < 1:4830972/68‑1 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT < 1:21869224/68‑1 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT < 1:10899563/68‑1 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:39422259/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:25054663/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:36088120/1‑65 CCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGC > 1:34148526/1‑65 CGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCGGCTGCGCTTCATCT < 1:46126338/68‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:26790522/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:3477446/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:31281612/65‑1 GACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCAT < 1:10011161/65‑1 GACATTGGCGGATACACCACCCTGTTTGAGATGAAGCGCAGCAAACAGCTGCTGCTGCGCTTCAT < 1:23056124/65‑1 CATTGGCGGTTATACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:49647987/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGACGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:6400663/68‑1 CATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAA < 1:13075512/68‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:45876333/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:16140494/67‑1 CGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGG < 1:3992678/67‑1 GGTAACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGT < 1:11303424/68‑1 GGTAACACCACCCAGTTTGACATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGT < 1:8639781/68‑1 TTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTG < 1:44280389/67‑1 TTACACCACCCTGTTTGAGATGAACCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTG < 1:45317591/67‑1 TACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGG < 1:43287026/67‑1 TACACCACCCTGTTTGAGATCAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGG < 1:18805858/67‑1 CCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCG < 1:15806215/68‑1 CCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCGGCGCTTCATCTCAAACAGGGTGGTGTAACCG < 1:26913016/68‑1 CCCTGTTTGAGAGGACCCGCACCAAAGAGCGGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCG < 1:33348546/68‑1 tcAAGCGCACCAAAGCGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCT < 1:1905065/65‑1 cGCGCCGAAAAGAGCTGCTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGG < 1:37438300/67‑1 GCACCAAAGCGCTGCTGCTGCGCTTCATCGCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGT < 1:38017841/66‑1 TGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTC > 1:50470438/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:41323690/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:38848863/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCA > 1:4885807/1‑68 GCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTCGTGCAGGCCATGTCCGGTCA > 1:3720723/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:28581021/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:26205416/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:23333520/68‑1 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT > 1:15280420/1‑68 TGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATT < 1:17222683/68‑1 GCTTCATCTCATACAGGGTGGTGTAACCGCCAATGTCGCTGTTGTGCAGGCCATGTCCGGTCATTGC < 1:4511147/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:9675928/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:5754786/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:3460597/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:29953040/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:28000584/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:26357106/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCC > 1:10842737/1‑68 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:47568741/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:22780540/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:18021482/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:13713507/67‑1 GCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGC < 1:13334107/67‑1 TTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG < 1:50686383/68‑1 TTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG < 1:25280806/68‑1 TTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG < 1:16553474/68‑1 TTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCA < 1:43522199/67‑1 TTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCA > 1:25852390/1‑67 GGCCTGCACCACAGCGACATTGGCGGTTACACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4061142‑4061067‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcgctTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGGTGCAGGCCATGTCCGGTCATTGCCAG > CP009273/4061094‑4061160 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |