| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4061067 = | 600 (0.970) | 57 (0.110) | 16/94 | NT | 11.4% | coding (1570/2037 nt) | yihQ | alpha‑glucosidase |
| ? | CP009273 | 4061094 = | 381 (0.730) | coding (1543/2037 nt) | yihQ | alpha‑glucosidase | |||||
Only 100 of 861 total aligned reads displayed.
CAGTTGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGG > CP009273/4061000‑4061134 | ctggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaa < 1:37935474‑M1/1‑1 (MQ=255) tggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaa > 1:6383522‑M1/67‑67 (MQ=255) aGTTGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCa > 1:46035169/1‑67 (MQ=255) ggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc > 1:42053297‑M1/66‑68 (MQ=255) ggcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc > 1:10842737‑M1/66‑68 (MQ=255) gcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc < 1:3591624‑M1/3‑1 (MQ=255) gcaatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgc < 1:13713507‑M1/3‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgcg < 1:15078888/67‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:5411800/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:7077046/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:36237939/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:39199043/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:12830920/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:45561221/66‑1 (MQ=255) tGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAgc < 1:11112955/66‑1 (MQ=255) caatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAgcgc < 1:32293025‑M1/5‑1 (MQ=255) gTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgca < 1:48295390/68‑1 (MQ=255) aatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgca < 1:17222683‑M1/6‑1 (MQ=255) aatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgca < 1:27678431‑M1/6‑1 (MQ=255) aatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgca < 1:23333520‑M1/6‑1 (MQ=255) aatgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgca < 1:29577124‑M1/6‑1 (MQ=255) tgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgcagc > 1:9113819‑M1/61‑68 (MQ=255) tgaccggacatggcctgcaccacagcgacattggcggttacaccaccctgtttgagatgaAGCgcagc > 1:34370333‑M1/61‑68 (MQ=255) cGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcag < 1:27125082/67‑1 (MQ=255) gCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagca < 1:16794107/68‑1 (MQ=255) ccAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagca > 1:29793049/1‑67 (MQ=255) ccAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagca > 1:38754644/1‑67 (MQ=255) ggACGGTTACCTTCGAGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCgcagcagca > 1:31109732/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGATGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:12561577/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:40906440/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:3169650/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:17928477/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:47040576/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:37443371/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:1455074/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc < 1:12229383/67‑1 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:30041831/1‑67 (MQ=255) aCGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCagcagcagc > 1:11592192/1‑67 (MQ=255) ggTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGctct > 1:23663088/1‑68 (MQ=255) ggTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGctct > 1:39502247/1‑68 (MQ=255) ggTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGctct > 1:30568262/1‑68 (MQ=255) ttACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCtt < 1:24714414/67‑1 (MQ=255) cTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTtgct > 1:33236816/1‑67 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:28196508/1‑68 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:46293323/1‑68 (MQ=255) ggTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCa > 1:46718118/1‑68 (MQ=255) agcgacattggcggttacaccaccctgtttgagatgaAGCGCAGCAGCAGCGCTTTGGTGCgcttga < 1:1905065‑M1/30‑3 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCCGCTCTTTGCTGCGCTTct > 1:20485827/1‑65 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:10464279/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:4481396/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:7617091/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:19877061/67‑1 (MQ=255) tGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCAt < 1:41597544/67‑1 (MQ=255) gcATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCa < 1:15651227/68‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:22399637/67‑1 (MQ=255) atcatcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCaa < 1:13187618/67‑1 (MQ=255) atcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAg > 1:5770963/1‑68 (MQ=255) atcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAg < 1:23966646/68‑1 (MQ=255) atcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAg > 1:7962896/1‑68 (MQ=255) tcGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAgg < 1:958081/68‑1 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt > 1:16226899/1‑68 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt < 1:43594907/68‑1 (MQ=255) ggCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggt > 1:42565297/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg > 1:8330242/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg > 1:40393631/1‑68 (MQ=255) cGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtg < 1:26415321/67‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt < 1:37296720/68‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt > 1:8895808/1‑68 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtggt < 1:32694984/68‑1 (MQ=255) gTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGggtgg < 1:43004377/67‑1 (MQ=255) gAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGgtgt < 1:21872160/68‑1 (MQ=255) gAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGgtgt < 1:22886502/68‑1 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa > 1:50757683/1‑67 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa > 1:50286942/1‑67 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa > 1:14211287/1‑67 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa > 1:35433750/1‑67 (MQ=255) ggCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa > 1:26191315/1‑67 (MQ=255) caccctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTaa < 1:44280389‑M1/50‑1 (MQ=255) accctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATGTCAAACTGGGTGGTGTTAcc < 1:8639781‑M1/52‑1 (MQ=255) gcTGAAATCGCACCAGCGCAGCAGCTGCTCTTTGCCGCGCTTCATCTCAAACAGGGTGGTGTAACCg < 1:47418295/67‑1 (MQ=255) gcTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCg > 1:39894556/1‑67 (MQ=255) cctgtttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCg < 1:45876333‑M1/53‑1 (MQ=255) ttgagatgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTATAACCGCCAATg < 1:49647987‑M1/59‑1 (MQ=255) aaTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg > 1:49279360/1‑68 (MQ=255) aaTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg < 1:27350964/68‑1 (MQ=255) aTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg > 1:34715414/1‑67 (MQ=255) aTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg > 1:48878971/1‑67 (MQ=255) aTCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATg > 1:51086124/1‑67 (MQ=255) tCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:28811639/68‑1 (MQ=255) tCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:38369671/68‑1 (MQ=255) atgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:10011161‑M1/61‑1 (MQ=255) atgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:25757710‑M1/61‑1 (MQ=255) atgaAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTc < 1:26790522‑M1/61‑1 (MQ=255) aCCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCt < 1:19432284/67‑1 (MQ=255) aCCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCt < 1:47805560/67‑1 (MQ=255) aCCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCt < 1:33720798/67‑1 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt > 1:6654947/1‑68 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt < 1:18261835/68‑1 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt > 1:21359685/1‑68 (MQ=255) ccAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCtgt < 1:25285138/68‑1 (MQ=255) | CAGTTGTCGCCAGGACGGTTACCTTCGTGGGTGCGCATCATCGGCGTGAAGGCGCTGAAATCGCACCAGCGCAGCAGCAGCTCTTTGCTGCGCTTCATCTCAAACAGGGTGGTGTAACCGCCAATGTCGCTGTGG > CP009273/4061000‑4061134 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |