| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 714 (1.150) | 27 (0.050) | 9/90 | NT | 5.4% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 371 (0.750) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 304 total aligned reads displayed.
GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4375242‑4375165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGG > CP009273/4375192‑4375257 GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTCTCGTCAGGTAG < 1:21685594/68‑1GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAG < 1:23222296/68‑1GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAG < 1:4075194/68‑1GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAG > 1:39542485/1‑68GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAG < 1:36179100/68‑1 TTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGAC > 1:42351793/1‑68 TTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGA < 1:29191328/67‑1 TTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGA < 1:1563511/67‑1 TTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGA < 1:33730114/67‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:35247655/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:20000658/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:21336091/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:249244/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:25462419/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:27195924/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:29949327/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:30074370/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:39805969/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:40339466/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:49671227/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:50406344/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:5505395/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:6387724/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:9604014/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:17684329/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:16763870/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:18271553/68‑1 TATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:14221304/68‑1 TATTGCCGGGTCCCGGCTGGTGGCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:2858155/68‑1 TATTGCCGGGTCCCGGCGGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACG < 1:45296401/68‑1 TTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGAT < 1:19377689/68‑1 TTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGAT < 1:50469518/68‑1 TTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGAT < 1:18758115/68‑1 TTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGAT < 1:18023262/68‑1 TTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGGCAGGTAGACGAT < 1:35986585/68‑1 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:46790451/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:121402/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:12065692/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:13133099/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:46243823/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:11451403/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:21399045/1‑68 CCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGGAGCCGATAGG > 1:18468095/1‑68 CCGGGTCCCGGCTGGTGTCAT‑CATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGG > 1:22491855/1‑67 CGGGTCCCGGCTGTTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:3834569/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:19596243/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:41344890/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:28256120/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:8259173/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:13845781/68‑1 CGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:4817251/68‑1 CGGGTCCCGGCTGGGGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:4358815/68‑1 CGGGTCCCGGCTGGGGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGG < 1:7724396/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:34244987/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:12849400/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:21935586/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:5021844/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:15882424/68‑1 GGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC < 1:9258635/68‑1 GGGTCCCGGCTGGGGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGGCAGGTCGACGATAGGGC < 1:6494710/68‑1 CGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCACGTAGACGATAGGGCGTAAAG < 1:8840383/68‑1 TGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGACAGGTAGACGATAGGGCGTAAAGACAGGA < 1:20795427/67‑1 cagCCAAAACATTTCCAGTCTAAACGCCCTATCGTCAGGTAGACGATAGGGCGTAAAGACAGGAAAT < 1:32453954/64‑1 CATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGCGTAAAGACAGGAAAT < 1:24549840/67‑1 CATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGCGTAAAGACAGGAAATGTTAT < 1:33376785/68‑1 TAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGCGTAAAGACAGGAAATGTTATGG < 1:6844469/68‑1 ACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATG > 1:26301690/1‑68 ACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATG > 1:8971657/1‑68 ACGATAGGGCGTAAAGACAGGAAATGTTATGGATGAAACCAGCCGGGACCCGGCAATAACCGAAGATG > 1:14794903/1‑68 CGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGA > 1:2566013/1‑68 GATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAA < 1:32209024/68‑1 GATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAA < 1:43894435/68‑1 ATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA > 1:11017369/1‑68 ATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA > 1:48784400/1‑68 ATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA > 1:24265312/1‑68 ATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCAAAGATGAAA > 1:14667241/1‑68 ATAGGGCATAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA > 1:8593199/1‑68 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:43093319/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:16483427/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:10097646/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:31260988/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:34658683/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:12587743/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:47786494/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:44532634/67‑1 TAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAA < 1:12647995/67‑1 AGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATC > 1:27938784/1‑68 AGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATC > 1:26926298/1‑68 GGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCA > 1:23957153/1‑68 GGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGAAATAACCGAAGATGAAATC > 1:17346621/1‑67 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:40843315/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:625745/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:3166073/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:17449594/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:47566998/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:23654894/1‑68 GGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAG > 1:17880475/1‑68 GCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGG > 1:36317528/1‑68 GCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGG > 1:4323752/1‑68 CGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGG > 1:37716231/1‑67 GGTTATTGCCGGGTCCCGGCTGGTGTCATCCATAACATTTCCTGTCTTTACGCCCTATCGTCAGGTAGACGATAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/4375242‑4375165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacgatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGG > CP009273/4375192‑4375257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |