| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 714 (1.150) | 27 (0.050) | 9/90 | NT | 5.4% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 371 (0.750) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 989 total aligned reads displayed.
GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 | cctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacattccctgtctttacGc > 1:49961821‑M1/67‑68 (MQ=255) ctgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGcc > 1:17449594‑M1/66‑68 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:11998861/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:12705532/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:39563216/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:4650621/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:1709762/67‑1 (MQ=255) cGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:22864153/67‑1 (MQ=255) cGATTAACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGc < 1:4329255/67‑1 (MQ=255) tgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGccc > 1:10370397‑M1/65‑68 (MQ=255) tgatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGccc > 1:15791669‑M1/65‑68 (MQ=255) gATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGccc < 1:40009322/68‑1 (MQ=255) gatttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCt > 1:27938784‑M1/64‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttatGCCCTAt > 1:8593199‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:18991504‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:14719973‑M1/62‑68 (MQ=255) tttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTAt > 1:11017369‑M1/62‑68 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:4301563/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:2330482/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:23818610/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:30910910/68‑1 (MQ=255) ttACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTAt < 1:45792687/68‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc > 1:18349495‑M1/61‑68 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc < 1:43894435‑M1/8‑1 (MQ=255) ttcatcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATc > 1:5875882‑M1/61‑68 (MQ=255) tACCACAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATc < 1:8279510/68‑1 (MQ=255) catcttcggttattgccgggtcccggctggtgtcatccataacatttcctgtctttacGCCCTATCGt > 1:8971657‑M1/59‑68 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:31312691/1‑66 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTa > 1:36951638/1‑66 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:45471462/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:38430543/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:38889124/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:16697946/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:2127941/68‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTAc < 1:46812374/67‑1 (MQ=255) aCTATTGCAGCAGAGTGGCAAAAAATCCGCAGGGGGCGGTGGAATAACCCGATGCCCTATCGTCTAcc < 1:33238545/68‑1 (MQ=255) tATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTg < 1:13517160/68‑1 (MQ=255) tATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTg < 1:2071374/68‑1 (MQ=255) ttGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGAc < 1:50570397/68‑1 (MQ=255) ttGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGAc < 1:26013153/68‑1 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:9549675/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACg > 1:15261951/1‑68 (MQ=255) tGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTCACg > 1:3014885/1‑68 (MQ=255) gcagcaGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGa > 1:35043219/1‑68 (MQ=255) gcagcaGAGTGGCAAAAAATCAGCAGTGGGCGGTGGAATAACACGATGCCCTATATTCTACCTGACGa > 1:44444220/1‑68 (MQ=255) agcagAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATa > 1:49001275/1‑68 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:16269520/1‑67 (MQ=255) agagTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg > 1:32856859/1‑67 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATACCCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:41565218/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:39218003/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:1779337/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:48074546/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAggg < 1:29048184/65‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:19583861/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:775332/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGt > 1:3207560/1‑68 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg < 1:40621431/67‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:21883830/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:6240660/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:42125582/68‑1 (MQ=255) aaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAgg > 1:26913855/1‑68 (MQ=255) ccGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGaaa < 1:14333183/68‑1 (MQ=255) cGCAGTGGGCGGTGTAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:5200680/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:25627434/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:48519304/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:28515808/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg > 1:35526326/1‑68 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:42571758/68‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:35851510/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:31632630/67‑1 (MQ=255) ccataacatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTa < 1:36196309‑M1/46‑1 (MQ=255) ccataacatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTa < 1:6844469‑M1/46‑1 (MQ=255) tGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTAt > 1:28810217/1‑68 (MQ=255) gggCGGTGTAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt < 1:34077666/65‑1 (MQ=255) gggCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTAt < 1:7296627/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:13215470/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCATATCGTCTACGTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa > 1:17968600/1‑68 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTTTAGACTGGAAATGTtttggctg < 1:32453954‑M1/52‑4 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:24419668/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:26461073/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac > 1:27400768/1‑67 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:37574085/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:4104427/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:20193202/67‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:6478260/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:45028532/68‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:22240616/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:47334635/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:24758214/68‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:34492395/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:47682170/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:29598848/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:10035161/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGCCGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:11461682/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:36412586/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:12444058/1‑68 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:33544070‑M1/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:25198890‑M1/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:12849400‑M1/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:9258635‑M1/68‑1 (MQ=255) | GCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCC > CP009273/4375099‑4375232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |