| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4375165 = | 714 (1.150) | 27 (0.050) | 9/90 | NT | 5.4% | intergenic (+7/‑45) | yjeM/yjeN | putative transporter/uncharacterized protein |
| ? | CP009273 | 4375192 = | 371 (0.750) | intergenic (+34/‑18) | yjeM/yjeN | putative transporter/uncharacterized protein | |||||
Only 100 of 860 total aligned reads displayed.
AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 | gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:3146335/67‑1 (MQ=255) gTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCg < 1:30693224/67‑1 (MQ=255) ggCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTaa > 1:41789208/1‑68 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAg < 1:40621431/67‑1 (MQ=255) aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa < 1:15772892/68‑1 (MQ=255) aaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACa < 1:43468641/68‑1 (MQ=255) aaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAg < 1:28705906/68‑1 (MQ=255) aaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAg < 1:48628764/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:7684713/68‑1 (MQ=255) aTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGa < 1:25645338/68‑1 (MQ=255) tgtcatccataacatttcctgtctttacgccctatcgacaggtagacgatagggcGTAAAGACAGGa < 1:20795427‑M2/12‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:14602618/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:22435802/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:25170205/68‑1 (MQ=255) cGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAAt < 1:25966161/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:49627332/68‑1 (MQ=255) gCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATg < 1:8408635/68‑1 (MQ=255) atccataacatttcctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAATGt < 1:8948715‑M2/17‑1 (MQ=255) aGTGGGCTGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:11469776/67‑1 (MQ=255) aGTGGGCGGTTGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:28294909/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt > 1:17106631/1‑68 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:12054871/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:38665042/67‑1 (MQ=255) aGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt < 1:48216495/67‑1 (MQ=255) cataacatttcctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAATGTTAt < 1:33376785‑M2/20‑1 (MQ=255) gggCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGtt < 1:36992354/65‑1 (MQ=255) gggCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTAt < 1:7296627/67‑1 (MQ=255) taacatttcctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAATGTTATgg < 1:34265691‑M2/22‑1 (MQ=255) taacattacctgtctttacgccctatcgtcaggtagacgatagggcGTAAAGACAGGAAATGTTATgg < 1:17916238‑M2/22‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:28920556/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:4691167/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:12917371/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg < 1:42201693/67‑1 (MQ=255) gCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGa > 1:31759787/1‑68 (MQ=255) cGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATCGAt > 1:12662032/1‑68 (MQ=255) acatttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGAt < 1:641675‑M1/51‑1 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTTTAGACTGGAAATGTtttggctg < 1:32453954‑M1/52‑4 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg < 1:6761652‑M1/52‑1 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg < 1:9653409‑M1/52‑1 (MQ=255) atttcctgtctttacGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATg < 1:26486619‑M1/52‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGaca < 1:24419668/68‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:49073529/67‑1 (MQ=255) ggAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac < 1:20193202/67‑1 (MQ=255) tAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg < 1:35608139/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGCCGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:11058899/68‑1 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAg > 1:36216924/1‑67 (MQ=255) aaCCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGc < 1:24758214/68‑1 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:45770922/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:33839613/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:18489817/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:17674507/1‑68 (MQ=255) cccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg > 1:10035161/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:43918905/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:19046035/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:41275084/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:47779680/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:8015387/1‑68 (MQ=255) ccGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCgg > 1:29751903/1‑68 (MQ=255) cGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGAAACCAGCCggg < 1:50267197/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:21275581‑M1/68‑1 (MQ=255) GCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGAccc < 1:21935586‑M1/68‑1 (MQ=255) CCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCg < 1:16171615‑M1/68‑1 (MQ=255) CCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCg < 1:3966596‑M1/68‑1 (MQ=255) CCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCg < 1:13845781‑M1/68‑1 (MQ=255) CCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCgg > 1:45241142‑M1/1‑68 (MQ=255) ATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCaa < 1:46473037‑M1/68‑1 (MQ=255) ATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCaa < 1:27737670‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:18271553‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:30074370‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:5082948‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:23619547‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:14221304‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:13195729‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:38239666‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:36786850‑M1/68‑1 (MQ=255) CGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGACGGGACCCGGCAATa < 1:47455251‑M1/68‑1 (MQ=255) GTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATa < 1:32107337‑M1/67‑1 (MQ=255) TCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATaa < 1:39219986‑M1/67‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:33001539‑M1/68‑1 (MQ=255) CTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAcc < 1:29204388‑M1/68‑1 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:27048265/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:5464795/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:12556888/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:1496929/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:8720736/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:39914058/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:19591776/1‑68 (MQ=255) aCCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa > 1:34753623/1‑68 (MQ=255) ccTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGaa > 1:35159488/1‑68 (MQ=255) tGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGa > 1:44722995/1‑68 (MQ=255) acgatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATg > 1:16627312‑M2/11‑68 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGTAATAACCGAAGATGaa > 1:43116407‑M2/9‑68 (MQ=255) gatagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaa < 1:10279616‑M2/60‑1 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:6198690‑M2/8‑68 (MQ=255) atagggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGaaa > 1:9270097‑M2/8‑68 (MQ=255) gggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCa > 1:23957153‑M2/5‑68 (MQ=255) gggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCa > 1:21732600‑M2/5‑68 (MQ=255) ggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg > 1:17449594‑M2/4‑68 (MQ=255) ggcGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg > 1:40843315‑M2/4‑68 (MQ=255) gTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGgc > 1:35927440/1‑68 (MQ=255) | AGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGC > CP009273/4375125‑4375259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |