| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4468828 | NA (NA) | 10 (0.020) | 5/92 | NT | NA | intergenic (+122/+23) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase |
| ? | CP009273 | = 4468837 | NA (NA) | intergenic (+131/+14) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase | |||||
Only 100 of 193 total aligned reads displayed.
ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4468752‑4468828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgcccgcgTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < CP009273/4468837‑4468771 TTGTAGCCCGGATAAGGAATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCTAAT > 1:26161324/1‑68 TGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:25224355/1‑67 TGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAAT > 1:32063318/1‑67 TAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGC > 1:34976443/1‑67 AGCCCGGATAAGGCATTCATGTCTCATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:46247768/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:12259583/1‑68 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:511685/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:18165020/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:27378071/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:28562159/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:15377266/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:38133807/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:3889216/67‑1 AGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCC < 1:4461624/67‑1 GCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCC > 1:16322369/1‑67 CCCGGATAAGGCATTCATGTCACATCCGGCATTCACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:49912996/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:34705078/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:39052271/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:8089672/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:44112223/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGC > 1:19462038/1‑68 CCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCAGC > 1:8751604/1‑68 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG < 1:32380862/68‑1 CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCG < 1:13013286/66‑1 GCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGATTGCCCGCGTGGTCAgc > 1:10525899/1‑65 CGTACGTTGTTAATGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGT > 1:676611/1‑68 TGTTAATGTTCGAATGCCCGCGTGTTCGCCTCGCGGGCATTCGAACATTAACAACGGACGGTTTGTTT > 1:23529159/1‑68 TGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCG > 1:19853048/1‑68 TGTTCGAATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCG > 1:44230158/1‑68 acTGCCCGCGTGTTATACTCGCGGGCATTCGAACATTAACAACCTACGTTTTGTTTATGCCGGATGTG < 1:26756950/66‑1 AATGCCCGCGTGTTCAACTCGCTGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGTTGTt > 1:19028297/1‑67 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:46547667/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:48745641/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:1172616/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:45557851/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:50459167/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:1286370/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:43354347/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:42047886/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:41160402/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:40846216/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:37512539/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:20455170/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:36609801/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG > 1:21905574/1‑68 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:22511731/68‑1 AATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:29605468/68‑1 AATGCCCGCGGGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTG < 1:26592142/68‑1 ATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGA < 1:17135923/68‑1 ATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGA < 1:3142274/68‑1 ATGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGA < 1:39776993/68‑1 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC > 1:10151073/1‑68 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC > 1:28801497/1‑68 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC < 1:27727252/68‑1 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC < 1:27668564/68‑1 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC > 1:45148289/1‑68 TGCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGAC < 1:23104116/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:30040457/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:1593536/68‑1 GCCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACA < 1:49326935/68‑1 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:258857/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:11376488/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:17299152/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:38610496/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:7515138/1‑68 CCCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:15516674/1‑68 CCCGCGTGTTCAACTAGAGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT > 1:41969301/1‑68 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATG < 1:30898180/68‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATG < 1:1790474/68‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:41530057/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:19258429/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:9602043/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:35382207/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:44886440/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:1457529/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:43683324/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:37528083/67‑1 CCGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACAT < 1:41713518/67‑1 CGCGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGA < 1:43118054/68‑1 CGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAAT > 1:316316/1‑68 CGTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAAT > 1:16082751/1‑68 GTGTTCAACTCGTGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:30448490/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACACCGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:12775269/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:5637197/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:7037070/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:6027516/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:8709588/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:6536513/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:9832040/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:48052526/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:46542631/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:37715019/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:36752321/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:34070518/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:33107801/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:31055004/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:16742579/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:16591594/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:14954784/68‑1 GTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < 1:1360484/68‑1 ATTTGTAGCCCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/4468752‑4468828‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatgcccgcgTGTTCAACTCGCGGGCATTCGAACATTAACAACGTACGTTTTGTTTATGCCGGATGTGACATGAATG < CP009273/4468837‑4468771 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |