| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 4468828 | NA (NA) | 10 (0.020) | 5/92 | NT | NA | intergenic (+122/+23) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase |
| ? | CP009273 | = 4468837 | NA (NA) | intergenic (+131/+14) | rraB/yjgM | protein inhibitor of RNase E/putative acetyltransferase | |||||
Only 100 of 895 total aligned reads displayed.
CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGT > CP009273/4468761‑4468895 | cGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGa < 1:11050209/68‑1 (MQ=255) cGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGa < 1:8112822/68‑1 (MQ=255) ggATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAg < 1:20887560/68‑1 (MQ=255) aTAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGtt > 1:7632942/1‑68 (MQ=255) aTAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGtt > 1:5951504/1‑68 (MQ=255) aTAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGt < 1:6668177/67‑1 (MQ=255) aaGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGa > 1:5615718/1‑68 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAac > 1:41277959/1‑67 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAac > 1:4688536/1‑67 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAac > 1:36975052/1‑67 (MQ=255) gCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAac > 1:50663228/1‑67 (MQ=255) gCATTCATGTCACATCCGGCAAAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAac > 1:27393327/1‑67 (MQ=255) cATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAc < 1:7337468‑M2/68‑2 (MQ=255) cATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAc < 1:46542631‑M2/68‑2 (MQ=255) cATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAc < 1:16742579‑M2/68‑2 (MQ=255) aTGTCACATCCGGCTTAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAAAAcgcggg > 1:45551280‑M2/1‑62 (MQ=255) aTGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgg < 1:19258429‑M2/67‑6 (MQ=255) aTGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgg < 1:27672670‑M2/67‑6 (MQ=255) aTGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgg < 1:15674970‑M2/67‑6 (MQ=255) aTGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgg < 1:41713518‑M2/67‑6 (MQ=255) tGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggc < 1:27811804‑M2/68‑8 (MQ=255) gTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggca > 1:44886086‑M2/1‑60 (MQ=255) tCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcat < 1:37669649‑M2/68‑10 (MQ=255) tCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcat < 1:39776993‑M2/68‑10 (MQ=255) cacaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACCcgcgggcatt < 1:26592142‑M2/68‑11 (MQ=255) cacaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcatt > 1:32470147‑M2/1‑58 (MQ=255) cacaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcatt > 1:43354347‑M2/1‑58 (MQ=255) cacaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcatt > 1:40846216‑M2/1‑58 (MQ=255) cacaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACAcgcgggcatt > 1:9729272‑M2/1‑58 (MQ=255) acaTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAttt > 1:39254325/1‑68 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:16413755/68‑1 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:530590/68‑1 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:29987964/68‑1 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:21816123/68‑1 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:6111338/68‑1 (MQ=255) caTCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttt < 1:25510172/68‑1 (MQ=255) tCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt > 1:14708733/1‑68 (MQ=255) tCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt < 1:44368217/68‑1 (MQ=255) tCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt > 1:1716625/1‑68 (MQ=255) tCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCAtttttt > 1:12007111/1‑68 (MQ=255) cATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTagag > 1:33578167/1‑68 (MQ=255) cAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTcgcg < 1:14006619/68‑1 (MQ=255) cAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTcgc > 1:44036987/1‑67 (MQ=255) acgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAAc > 1:25758277/1‑68 (MQ=255) cgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa > 1:23033233/1‑68 (MQ=255) cgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa < 1:34512675/68‑1 (MQ=255) cgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa < 1:25014525/68‑1 (MQ=255) cgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa < 1:49665409/68‑1 (MQ=255) cgtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa > 1:51057298/1‑68 (MQ=255) gtacgtTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACa > 1:42544422/1‑67 (MQ=255) gttgttAATGTTCGAATGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgt > 1:48525145‑M1/1‑24 (MQ=255) gttgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTCAGAGTTCGCGCAACATCCGc > 1:35668925/1‑68 (MQ=255) ttgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGc > 1:37489609/1‑67 (MQ=255) tgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCTGc > 1:19580817/1‑66 (MQ=255) tgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGc > 1:30138012/1‑66 (MQ=255) tgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGc > 1:22562870/1‑66 (MQ=255) tgttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGc > 1:19965803/1‑66 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCTGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:38614661/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:4887610/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:1441160/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:4051906/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:49254035/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:36642841/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:35256817/68‑1 (MQ=255) gttAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACt < 1:28634360/68‑1 (MQ=255) tAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTc < 1:5026554/68‑1 (MQ=255) aaTGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCCCTTc > 1:31893829/1‑67 (MQ=255) tGTTCGAATGCCCGCGAGTTGACCACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:21313928/1‑68 (MQ=255) tGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:1022536/1‑68 (MQ=255) tGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:38166360/1‑68 (MQ=255) tGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca < 1:3475439/68‑1 (MQ=255) tGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTcaca > 1:24350753/1‑68 (MQ=255) ttCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCTCTTCACaa > 1:47344826/1‑67 (MQ=255) cGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCg < 1:19060392/68‑1 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGa < 1:46112893/68‑1 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGa < 1:47853814/68‑1 (MQ=255) gAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGa < 1:26120320/68‑1 (MQ=255) aaTGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtg > 1:42047886‑M1/1‑10 (MQ=255) aaTGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtg > 1:8726858‑M1/1‑10 (MQ=255) aaTGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtg > 1:20455170‑M1/1‑10 (MQ=255) aaTGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtg > 1:1805226‑M1/1‑10 (MQ=255) aaTGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtg < 1:29605468‑M1/68‑59 (MQ=255) aaTGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGAc > 1:18724507/1‑68 (MQ=255) tGCCCGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgac > 1:45148289‑M1/1‑8 (MQ=255) tGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCACCATCCGCACTTCACAATCGACAt > 1:22163351/1‑68 (MQ=255) cccGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacat > 1:13236129‑M1/1‑6 (MQ=255) cccGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacat > 1:11376488‑M1/1‑6 (MQ=255) ccGCGtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatg < 1:30898180‑M1/68‑64 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATgg < 1:10016258/67‑1 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATgg < 1:23670665/67‑1 (MQ=255) ccGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATgg < 1:31209687/67‑1 (MQ=255) gcgAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGccc < 1:9428788/68‑1 (MQ=255) cgtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatgaat > 1:16082751‑M1/1‑2 (MQ=255) gtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatgaatg < 1:26866261‑M1/68‑68 (MQ=255) gtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatgaatg < 1:12832769‑M1/68‑68 (MQ=255) gtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatgaatg < 1:12602569‑M1/68‑68 (MQ=255) gtgttcaactcgcgggcattcgaacattaacaacgtacgttttgtttatgccggatgtgacatgaatg < 1:33107801‑M1/68‑68 (MQ=255) gAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGt < 1:1772853/68‑1 (MQ=255) gAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGt < 1:15100442/68‑1 (MQ=255) gAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGt < 1:36246298/68‑1 (MQ=255) | CCGGATAAGGCATTCATGTCACATCCGGCATAAACAAAACGTACGTTGTTAATGTTCGAATGCCCGCGAGTTGAACACGCGGGCATTTTTTTAGAGTTCGCGCAACATCCGCACTTCACAATCGACATGGCCCGT > CP009273/4468761‑4468895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |