| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 447701 = | 594 (0.960) | 25 (0.050) | 6/96 | NT | 5.1% | coding (1301/1476 nt) | ampG | muropeptide transporter |
| ? | CP009273 | 447798 = | 414 (0.780) | coding (1204/1476 nt) | ampG | muropeptide transporter | |||||
ACGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/447775‑447701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcggcAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > CP009273/447798‑447862 ACGAGTAAATGACAACTTTATCTCCCGTACCGCAAATCCGGCAGGTTAAGCCTTTGCCATGTGGACAC > 1:43818319/1‑68 CGAGTACATCACAACTTAATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACT < 1:20354027/68‑1 CGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACT < 1:13496566/68‑1 CGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACT < 1:49001332/68‑1 CGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACT < 1:1796081/68‑1 CGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACT < 1:43036415/68‑1 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:19557011/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:30802084/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:3100481/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:32626815/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:27572952/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:3614439/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:39423894/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:20154110/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:46969026/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:16147676/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:15209772/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:15128291/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:849494/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTG > 1:12502313/1‑67 AGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTATGCCATGTGGACACTG > 1:35543464/1‑67 GTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGG < 1:47828767/67‑1 GTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGG < 1:38944674/67‑1 GTAAACGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGG < 1:22202296/67‑1 TAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCATTGCCATGTGGACACTGGCG > 1:6255419/1‑68 AAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCG < 1:9900127/67‑1 AAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCG > 1:41488163/1‑67 AAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCG < 1:1613015/67‑1 AAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCG < 1:21832840/67‑1 AAATGACAACTTTATCACCCGTACCGCATATCCGGCCGGTTATGCCTTTGCCATGTGGACACTGGCG < 1:47645494/67‑1 AATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGC < 1:48123953/68‑1 CAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAAC < 1:5867860/67‑1 TATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGC < 1:16458697/68‑1 TCTCCCGAACCCCATAACCGGCAGGTTATGCCTTTCCCATGTGGACACTGGCGGCAAACCAGCAGCAA < 1:44528044/68‑1 caCCCCTACCGCATATCCGGCAGCTTATGCCTTTCCCATGTGGACACTGGCGGCAAACCAGCAGCAAA < 1:29139616/66‑1 CTCCCGTCCCGCAAAGCCGGCAGGTTATGCCTTTGCCACGTGGACACGGGCGGCAAACCAGCAGCAAA < 1:1698801/68‑1 CTCCCGTACCGCATATCCGGCAGGTTTTGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAA < 1:29903734/68‑1 CTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAA < 1:25827452/68‑1 CTCCCGTACCGCATATCCGCCAGGTTATGCCTTTGCCATGTGGCCACTGGCGGCAAACCAGCAGCAAA < 1:14909673/68‑1 CTCCCGTACCGCATACCCGGCAGGTTATGCCTTGGCCATGTGGACACTGGCGGCAAACCAGCAGCAAA < 1:18101719/68‑1 CTCCCGTACCGCAAATCCGGCAGGTTATGCCTTTCCCATGTGGCCACTGGCGGCAAACCAGCAGCAAA < 1:9235198/68‑1 CTCCCGTACCCCATATCCGGCAGGTTATGCCTTTGCCATGGGGACACTGGCGGCAAACCAGCAGCAAA < 1:33053158/68‑1 cCCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGCCACCGGCGGCAAACCAGCAGCAAAATAAGCC < 1:28653435/67‑1 ACCGCCTAACCGGCCGCTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGCC < 1:50903862/68‑1 ACCGCATATCCGGCAGGTTCTCCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGCC < 1:43787566/68‑1 ACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGC < 1:3063165/67‑1 ACCGCATATCCGGCAGGTTATCCCTTTGCCATCTGGACACGGGCGGCAAACCAGCAGCAAAATAAGC < 1:21566873/67‑1 ACCGCATATCCCCCAGGTTATGCCTTTGCCATGTCGACACTGGCGGCAAACCAGCAGCAAAATAAGC < 1:7833168/67‑1 ACCCCATCTCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGCC < 1:39646326/68‑1 ACCCCAAATCCGGCAGGTTATGCCTTTGCCATGTGGACCCGGGCGGCAAACCAGCAGCAAAATAAGCC < 1:48644648/68‑1 cCATATCCGGCCGGTTAGGCCATTGCCATGTGGACACGGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:6070437/67‑1 cCATATCCGGCAGGTTATGCCTTTCCCATGTGGCCACGGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:10771526/67‑1 cCATATCCGGCAGGTTATGCCTTTCCCATGGCGACCCTGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:19888395/67‑1 cCATACCCGGCCGGTTACGCCCTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:22198638/67‑1 GCATCTCCGGCAGGATATGCCTTAGCCAAGTGGACACTGCCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:49014259/68‑1 GCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:23867973/68‑1 GCATAGCCGGCAGGGTCTGCCTTTGCCATGTGCACCCTGGCGGCAAACCAGCAGCAAAATAAGCCCTG < 1:47271114/68‑1 CGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCA > 1:9773428/1‑68 CGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCA > 1:38319587/1‑68 GGCAAACCAGCACCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCA > 1:43352298/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGCCGGAGAATAGATAGAATGTCGACCAG > 1:34646995/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:28937510/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:13973240/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:7747577/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:36528531/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:40501072/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > 1:44291647/1‑67 GCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGA > 1:48335194/1‑56 GCAAACCAGCAGCAAAATAAGCCATGGTACGTAAGCGGCGACGGAGAATAGATAGAATGTCGAACAc > 1:35214532/1‑66 ACGAGTAAATGACAACTTTATCTCCCGTACCGCATATCCGGCAGGTTATGCCTTTGCCATGTGGACACTGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/447775‑447701‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcggcAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > CP009273/447798‑447862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |