| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 447701 = | 594 (0.960) | 25 (0.050) | 6/96 | NT | 5.1% | coding (1301/1476 nt) | ampG | muropeptide transporter |
| ? | CP009273 | 447798 = | 414 (0.780) | coding (1204/1476 nt) | ampG | muropeptide transporter | |||||
Only 100 of 600 total aligned reads displayed.
CCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > CP009273/447731‑447862 | ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:39011596/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:2524651/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:48000399/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:1732392/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:26177824/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:31795075/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:19308856/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:49966706/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:50896318/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:20702976/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:28293274/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:1364905/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:6570245/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:4472719/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:7354496/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:4533780/1‑68 (MQ=255)ccTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCa > 1:10677371/1‑68 (MQ=255) cGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACca < 1:28643676/68‑1 (MQ=255) gATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACcagc > 1:32788661/1‑68 (MQ=255) atGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCagcagc < 1:4600634/68‑1 (MQ=255) atGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCagcagc < 1:31361130/68‑1 (MQ=255) ctcccgtaccccatatccggcaggttatgcctttgccatggggacactggcggcAAACCAGCAGCaaa < 1:33053158‑M2/14‑1 (MQ=255) cacccctaccgcatatccggcagcttatgcctttcccatgtggacactggcggcAAACCAGCAGCaaa < 1:29139616‑M2/14‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa > 1:51034912/1‑68 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaaa > 1:12087374/1‑68 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:27399169/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:434502/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:20231294/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:38182709/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:18504665/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:49132079/67‑1 (MQ=255) ggTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCaaa < 1:12809480/67‑1 (MQ=255) tACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAAt < 1:30290375/67‑1 (MQ=255) aCGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATaa > 1:23781009/1‑68 (MQ=255) aCGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATaa > 1:40985564/1‑68 (MQ=255) gggAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc < 1:9073410/68‑1 (MQ=255) ggAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:16802601/1‑67 (MQ=255) gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGcc < 1:22082729/67‑1 (MQ=255) gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGcc < 1:43056784/67‑1 (MQ=255) gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGcc < 1:16998920/67‑1 (MQ=255) gagaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGcc < 1:1406198/67‑1 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:10016288/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:35905180/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:33947642/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:41992922/1‑65 (MQ=255) agaTAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGc > 1:4769511/1‑65 (MQ=255) ccatatccggccggttaggccattgccatgtggacacgggcggcAAACCAGCAGCAAAATAAGCCCTg < 1:6070437‑M2/24‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCGAAATAAGCCCTg < 1:47802996/66‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTg < 1:42468214/66‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTg < 1:46931132/66‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTg < 1:9597449/66‑1 (MQ=255) tAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTg < 1:22433675/66‑1 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:8271569/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:15982626/1‑68 (MQ=255) aaGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTAc > 1:21635135/1‑68 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:35375680/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:8558748/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:36919970/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:49332490/1‑67 (MQ=255) gTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACg > 1:40472549/1‑67 (MQ=255) tttACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAgcggc > 1:33654699/1‑68 (MQ=255) aCTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGAc > 1:34341015/1‑68 (MQ=255) aCTCGTGTATATTCAAGCGTCTGGCGGCAAACAAGCAGCAAAATAAGCCCTGGTACGGCAGCGCCGAc > 1:24660080/1‑68 (MQ=255) cTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACg > 1:38384999/1‑68 (MQ=255) tCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACgg > 1:34920604/1‑68 (MQ=255) cGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGga > 1:34644911/1‑68 (MQ=255) cGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGga > 1:10528209/1‑68 (MQ=255) gtATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGaa < 1:32072036/68‑1 (MQ=255) atatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAata > 1:36294699/1‑68 (MQ=255) atatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAata > 1:3730225/1‑68 (MQ=255) atatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAata > 1:41712659/1‑68 (MQ=255) atatTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAata > 1:6946703/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTATGGCAGCGGCGACGGAGAataga > 1:47407944/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:26807761/1‑68 (MQ=255) atTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAataga > 1:19648176/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCGGAGGCGACGGAGAatagat > 1:16555836/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:15229573/1‑68 (MQ=255) ttCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagat > 1:43869919/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:11619751/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:50574596/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:5217599/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:17976665/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:7912652/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:23038352/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:3000765/1‑68 (MQ=255) tCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagata > 1:25871809/1‑68 (MQ=255) cAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagatag > 1:24249700/1‑68 (MQ=255) cAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAatagatag > 1:35557246/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:48576212/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:13121534/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:16353597/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:30687031/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:21221414/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:39365909/1‑68 (MQ=255) aGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGaa > 1:27782762/1‑68 (MQ=255) cGTCTGGCGGCAAACNAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:11111999/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:14291893/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:46427709/1‑68 (MQ=255) cGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:39908968/1‑68 (MQ=255) gTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATg > 1:44335997/1‑67 (MQ=255) | CCTGCCGGATATGCGGTACGGGAGATAAAGTTGTCATTTACTCGTGTATATTCAAGCGTCTGGCGGCAAACCAGCAGCAAAATAAGCCCTGGTACGGCAGCGGCGACGGAGAATAGATAGAATGTCGACCAG > CP009273/447731‑447862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |