| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 877393 = | NA (NA) | 6 (0.010) | 3/90 | NT | NA | intergenic (+8/+39) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| ? | CP009273 | 877426 = | NA (NA) | intergenic (+41/+6) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx | |||||
Only 100 of 168 total aligned reads displayed.
AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/877470‑877393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > CP009273/877426‑877491 AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTACTGACGTATAACCGGATGACGTTTCGCGCC > 1:7726068/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGCCGTTTCGCGCC > 1:40123115/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:21865343/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:32259206/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:38029798/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:4121990/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:43329709/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:18966144/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:50719893/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:17181736/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:51071331/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:16033310/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:9675434/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:15139231/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:8797035/1‑68AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:11711113/1‑68AAGTACGCGCAGACGCAGCGCAGTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC > 1:3670888/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:5333716/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:36622502/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:28108877/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:40691203/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:1252158/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:46837481/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:13497231/1‑68 AGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCC < 1:43089939/67‑1 GTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:33306329/1‑67 GTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:27443205/1‑67 TACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCAT > 1:22192437/1‑67 TACGCGCAGACGCAGAGCATTAAGTTGATGTATTAATGACGTATAACCGGATGCCGGTTCGCGCCtt > 1:15491136/1‑65 ACGCGCAGACGCAGCGCATTAAGTTGCTGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC < 1:50316613/68‑1 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC > 1:48697322/1‑68 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC > 1:26862431/1‑68 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC > 1:13288930/1‑68 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC > 1:11788450/1‑68 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC > 1:34212407/1‑68 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCAT < 1:38080292/66‑1 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCAT < 1:50600042/66‑1 ACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCAT < 1:32805797/66‑1 ACGCGCAGACGCAGCGCACTAAGTTGATGTATTAATGACGGATAACCGGATGACGTTGCGCGCCAT < 1:48132375/66‑1 GCGCAGCCGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG > 1:36559545/1‑68 GCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG < 1:37692148/68‑1 GCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG > 1:43913816/1‑68 GCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG < 1:22238594/68‑1 tCAGACGCAGCTCATTAAGTTGAGGTATTAATGCCGTATAACAGGCTGACGTTTCGCGCCATCCGGT < 1:677471/66‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATCACCGGATGACGTTTCGCGCCATCCGGT < 1:23724681/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGTATGACGTTTCGCGCCATCCGGT < 1:37188632/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:47776315/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:40406326/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:23266857/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:45850698/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:46184522/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:32439576/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:48977507/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:49440689/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:19811139/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:18515058/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:16077243/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:845674/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:34132143/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:3266707/67‑1 GCAGACGCAGCGCATTAAGTTGATGTATAAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:29876365/67‑1 CAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 1:7612600/1‑68 CAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 1:27615814/1‑68 CAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 1:37333488/1‑68 AGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA < 1:35020201/67‑1 CGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT < 1:10707409/65‑1 CGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT < 1:18804334/65‑1 TGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAA < 1:40926018/68‑1 AATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCG < 1:39368565/68‑1 AATGACGTATAACCGGATCTCGTTTCGCGCCAACCGGTTATACGTCATTAATACATCAACTTAATGCG < 1:47766938/68‑1 CCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTTCTTCACATACTCATCTT > 1:49872988/1‑67 CCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTT > 1:15492821/1‑67 CCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTT > 1:29615482/1‑67 CCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTT > 1:10169535/1‑67 CCGGTTATACGTCATTAATACATCAACTTAATGCGCTGAGTCAGCGCGAACTTCACATACTCATCTT > 1:24824965/1‑67 CCGGATATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACAAACTCATCTT > 1:8191678/1‑67 CGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATGCTCATCTTCC > 1:28944488/1‑68 CGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCC > 1:44862089/1‑68 GGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCCCATACTCATCTTCCG > 1:40827654/1‑68 GGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCG > 1:30066564/1‑68 GGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCG > 1:48529760/1‑68 GGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCG > 1:20727542/1‑68 GTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGG > 1:46228566/1‑68 GTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGG > 1:8473508/1‑68 GTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGG > 1:3435679/1‑68 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTTCTTCACATACTCATCTTCCGGG < 1:4154074/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:5466024/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:11218368/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:35953398/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:16725829/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:22343719/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:45157621/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:42477538/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:25191217/67‑1 TATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG < 1:39829640/67‑1 ATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA < 1:28689371/68‑1 ATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA < 1:23002433/68‑1 ATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > 1:31805909/1‑68 TACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > 1:44987074/1‑67 TACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > 1:25306266/1‑67 AAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/877470‑877393‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > CP009273/877426‑877491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |