| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 877393 = | NA (NA) | 6 (0.010) | 3/90 | NT | NA | intergenic (+8/+39) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| ? | CP009273 | 877426 = | NA (NA) | intergenic (+41/+6) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx | |||||
Only 100 of 386 total aligned reads displayed.
CGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTC > CP009273/877326‑877459 | cGGGTTTGTGATTTCGTTATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGa < 1:9158711/68‑1 (MQ=255)cGGGTGTGGGATTTCTTGATGATGAAATTCCCTCAGTGGTTAGGCAGCTGGTTCTCTTAATCTTCTGa > 1:30825511/1‑68 (MQ=255)cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGa > 1:27410800/1‑68 (MQ=255)cGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGa > 1:38578314/1‑68 (MQ=255) tgcccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtat < 1:23002433‑M1/2‑1 (MQ=255) ggTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATa > 1:25360932/1‑68 (MQ=255) cccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:22343719‑M1/3‑1 (MQ=255) cccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:37474271‑M1/3‑1 (MQ=255) cccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:4534355‑M1/3‑1 (MQ=255) cccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:15040953‑M1/3‑1 (MQ=255) cccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:45157621‑M1/3‑1 (MQ=255) cccggaagatgagtatgtgaagaacgcgcagacgcagcgcattaagttgatgtattaatgacgtata < 1:4154074‑M1/3‑1 (MQ=255) ccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtATAAc > 1:1688924‑M1/64‑68 (MQ=255) ccggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtATAAc > 1:8473508‑M1/64‑68 (MQ=255) gtgGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAAc < 1:7729721/67‑1 (MQ=255) cggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtATAAcc > 1:48529760‑M1/63‑68 (MQ=255) ggaagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtATAACCg > 1:44862089‑M1/62‑68 (MQ=255) aagatgagtatgtgaagtacgcgcagacgcagcgcattaagttgatgtattaatgacgtATAACCgg > 1:29615482‑M1/60‑67 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:15796215/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:13978333/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:37799252/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:6539139/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:30512887/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:698524/1‑68 (MQ=255) gATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGAt > 1:23345523/1‑68 (MQ=255) aTTTCGTGATGATGAAATTCCATGAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATg > 1:31443611/1‑68 (MQ=255) aTTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATg > 1:10095097/1‑68 (MQ=255) ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGgc > 1:9705709/1‑68 (MQ=255) ttCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGgc < 1:31968621/68‑1 (MQ=255) tgatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGa > 1:19408014/1‑68 (MQ=255) gatgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGaa > 1:40719229/1‑68 (MQ=255) tgatgaAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAAc < 1:33866216/68‑1 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCg > 1:16400078/1‑68 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCg < 1:11977533/68‑1 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCg > 1:39451510/1‑68 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCg > 1:37124194/1‑68 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCg < 1:46232271/68‑1 (MQ=255) ttCCATCAGTGGTTCGGCAGCTGGTTCGCTTAATCTTCTGATAACCGGATGGCGCGAAACCTCATCCg > 1:35582339/1‑68 (MQ=255) tCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCgg > 1:42229026/1‑68 (MQ=255) tCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCgg < 1:18567300/68‑1 (MQ=255) tCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCgg < 1:50767201/68‑1 (MQ=255) tCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCgg < 1:46014002/68‑1 (MQ=255) tCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCgg > 1:47489151/1‑68 (MQ=255) tCCATCAGTGGTTCGGCAGCGGGTTCTCTTAATCTTCTGATAACCGGCCGGCGCGAAACGTCATCCgg < 1:11010221/68‑1 (MQ=255) ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGt < 1:10686529/68‑1 (MQ=255) ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGt < 1:25944752/68‑1 (MQ=255) ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGt < 1:13548829/68‑1 (MQ=255) ccATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGt < 1:1250758/68‑1 (MQ=255) ccATCAGTGGTGCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGt < 1:30304896/68‑1 (MQ=255) tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTtat > 1:18642031/1‑68 (MQ=255) tCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTtat > 1:42869848/1‑68 (MQ=255) cAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTtat > 1:43337124/1‑67 (MQ=255) aGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGTAAGGCCCGAAACCTCATCCGGTTATAc > 1:30090938/1‑68 (MQ=255) cgcagcgcattaagttgatgtattaatgacgtATAACCGGCTGGCGCGAACCGTCATGCGGGTTTACg < 1:43805621‑M1/36‑1 (MQ=255) tGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg > 1:17840349/1‑67 (MQ=255) tGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg > 1:40549479/1‑67 (MQ=255) tGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg > 1:7290339/1‑67 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGt < 1:3599638/67‑1 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTc > 1:1555897/1‑68 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:11391978/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:49204850/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:21820727/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:47808731/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAt > 1:44507329/1‑68 (MQ=255) gtCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:27655999/66‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:40056942/68‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:39196461/68‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:1293322/68‑1 (MQ=255) ggCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTaa > 1:14234397/1‑68 (MQ=255) cAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAAt > 1:17441315/1‑67 (MQ=255) aGCTGGTTCTCTTAATCTTCTGATAACCGGATGGGGCGAAACGTCATCCGGTTATACGTCATTAATAc > 1:20466039/1‑68 (MQ=255) aGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATAc > 1:26151630/1‑68 (MQ=255) aGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATAc > 1:8279363/1‑68 (MQ=255) tGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTGATCCGGTTATACGTCATTAATACa < 1:23791160/66‑1 (MQ=255) tGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACa < 1:34186143/66‑1 (MQ=255) ttgatgtattaatgacgtATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCa < 1:40926018‑M1/50‑1 (MQ=255) ggTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCa > 1:47013194/1‑68 (MQ=255) ggTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCa > 1:29024071/1‑68 (MQ=255) ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCaa < 1:39688022/67‑1 (MQ=255) tctcTTAATCTTTTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:49953837/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:38333795/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:48764706/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACt > 1:42436092/1‑68 (MQ=255) ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACtt > 1:33268036/1‑68 (MQ=255) tAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAAt > 1:16153907/1‑67 (MQ=255) aaTATTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc < 1:51037677/68‑1 (MQ=255) aTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:28782582/1‑67 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:24422343/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:28171709/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:628213/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:6045868/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:44226843/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:19658299/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:33001643/1‑66 (MQ=255) cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt < 1:25691054/68‑1 (MQ=255) cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt < 1:35325073/68‑1 (MQ=255) ttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt > 1:38879912/1‑67 (MQ=255) tctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGc < 1:26734411/68‑1 (MQ=255) ctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg < 1:27748660/68‑1 (MQ=255) ATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg < 1:18804334‑M1/65‑1 (MQ=255) | CGGGTGTGGGATTTCGTGATGATGAAATTCCATCAGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTC > CP009273/877326‑877459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |