| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 877393 = | NA (NA) | 6 (0.010) | 3/90 | NT | NA | intergenic (+8/+39) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| ? | CP009273 | 877426 = | NA (NA) | intergenic (+41/+6) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase (penicillin‑binding protein 6a)/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx | |||||
Only 100 of 434 total aligned reads displayed.
AGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAAC > CP009273/877360‑877493 | aGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATAc > 1:44516761/1‑68 (MQ=255)aGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATAc > 1:33428816/1‑68 (MQ=255)aGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATAc > 1:48571472/1‑68 (MQ=255) gTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACg > 1:15848210/1‑68 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGt < 1:3599638/67‑1 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGt < 1:44962522/67‑1 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTc > 1:24061430/1‑68 (MQ=255) ggTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTc > 1:1555897/1‑68 (MQ=255) ggTGCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGt < 1:31167903/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:40657248/67‑1 (MQ=255) ttCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:49964763/67‑1 (MQ=255) gtCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCa < 1:27655999/66‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:18797089/68‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:1293322/68‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:39196461/68‑1 (MQ=255) tCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAt < 1:6722124/67‑1 (MQ=255) gcGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCAtt < 1:9407859/67‑1 (MQ=255) aGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATa < 1:16366236/67‑1 (MQ=255) aGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATAc > 1:42381682/1‑68 (MQ=255) tGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACa < 1:41028856/66‑1 (MQ=255) ggTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCa > 1:29024071/1‑68 (MQ=255) ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCaa < 1:12227360/67‑1 (MQ=255) ttCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCaa < 1:35447075/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:42811164/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:39862031/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:7385193/67‑1 (MQ=255) tctcTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAAc < 1:33176082/67‑1 (MQ=255) ctctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACtt < 1:17307012/68‑1 (MQ=255) ctTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTaa < 1:41532510/68‑1 (MQ=255) ttAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAAt > 1:6206469/1‑68 (MQ=255) aatgacgtataaccggatctcgtttcgcgccaaccggttatACGTCATTAATACATCAACTTAATgcg < 1:47766938‑M2/27‑1 (MQ=255) aTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:49387366/1‑67 (MQ=255) aTCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:14486876/1‑67 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:37368936/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:19658299/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:29501722/1‑66 (MQ=255) tcttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATgc > 1:46257940/1‑66 (MQ=255) cttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt < 1:14019366/68‑1 (MQ=255) ttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt > 1:38425024/1‑67 (MQ=255) ttctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCt > 1:30433542/1‑67 (MQ=255) tctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGc < 1:26734411/68‑1 (MQ=255) tctGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGc < 1:21884783/68‑1 (MQ=255) gATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCg > 1:37698812/1‑66 (MQ=255) TAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCt < 1:16037087‑M1/67‑1 (MQ=255) TAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCt < 1:35020201‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:40406326‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:38751417‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:37065289‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:18515058‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:45980021‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:48977507‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:23266857‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:32753023‑M1/67‑1 (MQ=255) ACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgc < 1:32439576‑M1/67‑1 (MQ=255) CCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTgcgc > 1:43913816‑M1/1‑68 (MQ=255) GGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACAGCAACTTAATGCGCTGCGTCTGCGCGt < 1:50316613‑M1/68‑1 (MQ=255) ATGGCGCGCAACGTCATCCGGTTATCCGTCATTAATACATCAACTTAGTGCGCTGCGTCTGCGCGt < 1:48132375‑M1/66‑1 (MQ=255) ATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt < 1:36204026‑M1/66‑1 (MQ=255) ATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGt < 1:50600042‑M1/66‑1 (MQ=255) TGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTAc > 1:27443205‑M1/1‑67 (MQ=255) TGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt > 1:31772981‑M1/1‑68 (MQ=255) TGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt > 1:1252158‑M1/1‑68 (MQ=255) TGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACt > 1:5333716‑M1/1‑68 (MQ=255) GGCGCGATACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:17985201‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:38029798‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:8797035‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:11711113‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:47068756‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:43329709‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:15139231‑M1/1‑68 (MQ=255) GGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACtt > 1:51015878‑M1/1‑68 (MQ=255) cgcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc < 1:10957825/67‑1 (MQ=255) cgcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTc < 1:22874177/67‑1 (MQ=255) gcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTca < 1:5792097/67‑1 (MQ=255) gcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTca < 1:21304564/67‑1 (MQ=255) gcgAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTca < 1:8326994/67‑1 (MQ=255) aaCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATa < 1:20605834/67‑1 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACt < 1:20101438/68‑1 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACt < 1:17029614/68‑1 (MQ=255) aCGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACt < 1:13592201/68‑1 (MQ=255) cGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTc < 1:44191159/68‑1 (MQ=255) ccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCtt > 1:3668929‑M2/9‑67 (MQ=255) ccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCtt > 1:10169535‑M2/9‑67 (MQ=255) ccggttatACGTCATTAATACATCAACTTAATGCGCTGAGTCAGCGCGAACTTCACATACTCATCtt > 1:24824965‑M2/9‑67 (MQ=255) ccggatatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACAAACTCATCtt > 1:8191678‑M2/9‑67 (MQ=255) cggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTcc < 1:27835892‑M2/61‑1 (MQ=255) ggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCCCATACTCATCTTCCg > 1:40827654‑M2/7‑68 (MQ=255) ggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCg > 1:30066564‑M2/7‑68 (MQ=255) gttatACGTCATTAATACATCAACTTAATGCGCTGc < 1:34054823‑M2/31‑1 (MQ=255) gttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCgg > 1:39563376‑M2/6‑68 (MQ=255) gttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCgg > 1:8473508‑M2/6‑68 (MQ=255) gttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCgg > 1:3435679‑M2/6‑68 (MQ=255) tatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg < 1:19191434‑M2/64‑1 (MQ=255) tatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg < 1:22343719‑M2/64‑1 (MQ=255) tatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg < 1:28518391‑M2/64‑1 (MQ=255) tatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg < 1:4534355‑M2/64‑1 (MQ=255) tatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCggg < 1:11218368‑M2/64‑1 (MQ=255) tACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCa > 1:25306266‑M2/2‑67 (MQ=255) aCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaac > 1:13331254/1‑68 (MQ=255) aCGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGcaac > 1:25926603/1‑68 (MQ=255) | AGTGGTTCGGCAGCTGGTTCTCTTAATCTTCTGATAACCGGATGGCGCGAAACGTCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAAC > CP009273/877360‑877493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |