| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1546288 = | NA (NA) | 37 (0.080) +TGTAAAAGGCGC |
5/88 | NT | NA | intergenic (+40/+367) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| ? | CP009273 | 1546470 = | NA (NA) | intergenic (+222/+185) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator | |||||
Only 100 of 172 total aligned reads displayed.
ACAAAGCCTACGTTGTCTACAATATGAAAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1546323‑1546288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGC > CP009273/1546470‑1546535 |||||||||||| ACAAAGCCTACGTTGTCTACAATATGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACA > 1:32847657/1‑67 GCCTACGTTGTCTACAATATGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAG > 1:27985075/1‑68 TTGTCTACAATATGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGT > 1:25135751/1‑68 TGTCTACAATATGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGT > 1:24495918/1‑67 TGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA < 1:8726994/66‑1 TGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGA < 1:20170093/66‑1 AAATGGCGCTGTAAAAGGGGACATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCG < 1:36504799/67‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGG < 1:5867336/68‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGG < 1:42889196/68‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGG < 1:12431910/68‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGG < 1:38070451/68‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCG < 1:24708384/67‑1 AAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCG > 1:28082100/1‑67 AAATGGCGCGGTAAAAGGAGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCG < 1:15749002/67‑1 AATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACTACGTAGGCTTTGTTCATGCCGGATGCGGC < 1:20651321/68‑1 AATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGC > 1:41821217/1‑68 ATGGCGCTGTAAAAGGCGCGTTTTTCATATTGTAGACAACGAAGGCTTTGTTGATGCCGGCTGCGGCG > 1:11507827/1‑68 ATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCG < 1:29450835/68‑1 ATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCG > 1:29958537/1‑68 ATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCG < 1:26303330/68‑1 TGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT < 1:30205453/68‑1 TGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT < 1:1988507/68‑1 TGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT < 1:48605660/68‑1 TGGCGCTGTAAAAGGCGCCATCTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT < 1:47322392/68‑1 TGGCGCGGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGT < 1:29772355/68‑1 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:24304809/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:27011542/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:32758268/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:38696945/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:31671391/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:20023242/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:23806855/1‑68 GCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:50443925/1‑68 CGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGA > 1:1079732/1‑67 GCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAC > 1:125712/1‑68 GCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAC > 1:31341004/1‑68 TGTATAAGGCGCCATTTTCATATTGAAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:46325234/67‑1 TGTAACAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:31849104/68‑1 TGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:20951065/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACACCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:23630713/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:15515753/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:1019141/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:14222585/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:36247022/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:4395902/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:51304200/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:6505798/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:16846061/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:28794600/68‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:1769691/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:48946734/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:39285658/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:35493977/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:34138598/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACG < 1:8252695/67‑1 TGTAAAAGGCGCCATTTTCATATTGTAGACAACGGAGGCTTTGTTCATGCCGGATGCGGCGTGAACGC < 1:33041516/68‑1 GTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCC < 1:31009907/68‑1 GTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCC < 1:24224654/68‑1 GTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCC < 1:34090758/68‑1 GTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCC < 1:27345483/68‑1 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTT > 1:12660599/1‑68 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTT > 1:5573370/1‑68 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTT > 1:23403029/1‑68 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT < 1:29680535/67‑1 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT < 1:16831295/67‑1 AAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCT < 1:13581729/67‑1 AAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTA < 1:7116254/68‑1 AAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGGGCATGCCGGATGCGGCGTGAACGCCTTAT < 1:32600112/68‑1 AAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTA > 1:27484992/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATTCCGGATTCTGCGTGACCGCCTTAg > 1:15113883/1‑66 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGGGGCGTGAACGCCTTAT > 1:49775962/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT > 1:16293368/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT > 1:11206323/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT > 1:26367675/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT > 1:35135331/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTAT > 1:6229456/1‑67 AGGCGCCATTTTCATATTGTAGACAACGTAGCCTTTGTTCATGACGCATGCGGCGTGAACGCCTTAT > 1:48497715/1‑67 gccCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:18457007/4‑68 GCGCCATTTTCATTTTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGGGTGAACGCCTTATCCG > 1:22218595/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATTCCGGATGCGGCGTGAACGCCTTATCCG > 1:48541502/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:5994012/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:23417757/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:10501190/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:38201915/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:7019774/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:20840699/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:47482058/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:4723443/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:26144943/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:39210288/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:28858724/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:3317966/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:26709378/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:32238210/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:3047325/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCG > 1:15920930/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATACG > 1:10039632/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCGTATCCG > 1:37698365/1‑68 GCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGAGGCGTGAACGCCTTATCCG > 1:34800121/1‑68 GCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGG < 1:12102025/67‑1 |||||||||||| ACAAAGCCTACGTTGTCTACAATATGAAAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1546323‑1546288‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGC > CP009273/1546470‑1546535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |