| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1546288 = | NA (NA) | 37 (0.080) +TGTAAAAGGCGC |
5/88 | NT | NA | intergenic (+40/+367) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator |
| ? | CP009273 | 1546470 = | NA (NA) | intergenic (+222/+185) | fdnI/yddM | formate dehydrogenase‑N, cytochrome B556 (gamma) subunit, nitrate‑inducible/putative DNA‑binding transcriptional regulator | |||||
Only 100 of 604 total aligned reads displayed.
AAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAT > CP009273/1546224‑1546334 | tcacgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacagcgc > 1:20023242‑M1/65‑68 (MQ=255)tcacgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacagcgc > 1:1257951‑M1/65‑68 (MQ=255)tcacgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacagcgc > 1:31671391‑M1/65‑68 (MQ=255)tcacgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacagcgc > 1:32758268‑M1/65‑68 (MQ=255)tcacgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacagcg > 1:1079732‑M1/65‑67 (MQ=255) acgccgcatccggcatgaacaaagcctacgttgtctacaatatgaagatggcgccttttacaGCGCCa < 1:47322392‑M1/6‑1 (MQ=255) acgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacaGCGCCa < 1:23445945‑M1/6‑1 (MQ=255) cgccgcatccggcatgaacaaagcctacgttgtctacaatatgaaaatggcgccttttacaGCGCCAt > 1:42714923‑M1/62‑68 (MQ=255) agagagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAt < 1:47134646/68‑1 (MQ=255) gagagaAGAAGGTATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtt < 1:24352057/66‑1 (MQ=255) gagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtt < 1:41087442/66‑1 (MQ=255) gagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtt < 1:29652919/66‑1 (MQ=255) gagTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtt < 1:39775206/66‑1 (MQ=255) agTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTc > 1:36062704/1‑68 (MQ=255) gTGGAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtttt < 1:8751230/66‑1 (MQ=255) gTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCAtttt < 1:4580500/66‑1 (MQ=255) gaagaaGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCat < 1:41772095/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:9237122/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:42242421/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:39145234/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:35480292/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:31948411/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:49121331/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:2997503/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:50700018/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:568213/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:2916494/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:26394747/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:7560207/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:18533931/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:10280720/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:1614140/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:19612092/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCatat < 1:21408190/67‑1 (MQ=255) agaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATAtt > 1:40649498/1‑68 (MQ=255) gaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTg > 1:19402391/1‑68 (MQ=255) gaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTg > 1:25265607/1‑68 (MQ=255) gaagGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCAGATTg > 1:23116405/1‑68 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGTTGTAAAAGGCGCCATTTTCATATTGTa > 1:8009168/1‑68 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGt < 1:18033493/67‑1 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTa > 1:38484529/1‑68 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTa > 1:31255311/1‑68 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTa < 1:35110209/68‑1 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTa > 1:18698502/1‑68 (MQ=255) agGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAACGCGCCATTTTCATATTGt < 1:35822737/67‑1 (MQ=255) agGGATATAATCTCATTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGt < 1:14066259/67‑1 (MQ=255) ggATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAg > 1:24905078/1‑67 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:16438086/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:37826132/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:43149107/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:43536275/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:34411089/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:18992606/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:50349186/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACaa < 1:6043554/68‑1 (MQ=255) tataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACa > 1:49965284/1‑67 (MQ=255) ataATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAAc < 1:12287851/68‑1 (MQ=255) aaTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACATCGt > 1:4434188/1‑68 (MQ=255) aaTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGt > 1:5210416/1‑68 (MQ=255) aaTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGt > 1:47772132/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:32849267/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:24667745/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:25971019/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:17255687/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:2759188/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:38160426/1‑68 (MQ=255) aTCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTa > 1:34911001/1‑68 (MQ=255) tctcTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAg > 1:27139074/1‑68 (MQ=255) tctcTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAg > 1:22453465/1‑68 (MQ=255) ctctTTTGAACTTTTAGCTGAAAATCGCGCTGTAAAAGGCGCAATTTTCATATTGTAGACAACGTAgg < 1:13889796/68‑1 (MQ=21) ctctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAgg < 1:1462120/68‑1 (MQ=255) ctctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCAGATTGTAGACAACGTAg > 1:48400100/1‑67 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:13113061/68‑1 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:8329146/68‑1 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:17633691/68‑1 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:23910267/68‑1 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:20789521/68‑1 (MQ=255) tctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGc < 1:30621257/68‑1 (MQ=255) ctTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCt > 1:37112063/1‑68 (MQ=255) tttGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCttt > 1:13567006/1‑68 (MQ=255) tGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGt < 1:46431134/68‑1 (MQ=255) tGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGt < 1:6749762/68‑1 (MQ=255) tGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGt < 1:6479552/68‑1 (MQ=255) gAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGtt < 1:15086385/68‑1 (MQ=255) aCTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa > 1:10040383/1‑68 (MQ=255) aCTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa > 1:25490308/1‑68 (MQ=255) aCTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa > 1:49429076/1‑68 (MQ=255) aCTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa > 1:36459870/1‑68 (MQ=255) aCTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa > 1:40362723/1‑68 (MQ=255) cTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt < 1:20362531/68‑1 (MQ=255) cTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt < 1:41426437/68‑1 (MQ=255) tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCAt > 1:45115815/1‑67 (MQ=255) tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATg < 1:22643222/68‑1 (MQ=255) tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATg < 1:11286264/68‑1 (MQ=255) tttAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATg < 1:43940459/68‑1 (MQ=255) aaGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg < 1:33674610/68‑1 (MQ=255) aaGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg < 1:48345695/68‑1 (MQ=255) aaGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg < 1:28327053/68‑1 (MQ=255) aaGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg < 1:22090376/68‑1 (MQ=255) gCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa > 1:11956518/1‑68 (MQ=255) | AAAAGAGAGTGAAGAAGGGATATAATCTCTTTTGAACTTTAAGCTGAAAATGGCGCTGTAAAAGGCGCCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGAT > CP009273/1546224‑1546334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |