| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1894241 = | 433 (0.700) | 15 (0.030) | 6/90 | NT | 5.0% | coding (1558/1599 nt) | yoaD | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase, regulator of cellulose production |
| ? | CP009273 | 1894274 = | 219 (0.440) | coding (1591/1599 nt) | yoaD | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase, regulator of cellulose production | |||||
Only 100 of 412 total aligned reads displayed.
AAAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1894318‑1894241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattatgccgTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAACA > CP009273/1894274‑1894340 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATACTGGGCGTGATATGTCC < 1:23500898/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:10245129/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:45568860/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:39282378/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:38001413/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:37728310/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:32345612/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:28284588/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:18478168/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:15196526/68‑1 AAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCC < 1:12249365/68‑1 AGAGCAACCGGCGCACGATGAAGATGTGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:79322/1‑68 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCga < 1:39750528/68‑3 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:2162897/1‑68 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:19937598/1‑68 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA < 1:1919648/68‑1 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA < 1:31902880/68‑1 AGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCA > 1:31075656/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATTGGCGTGATATGTCCATT > 1:37283151/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:4218348/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:50425869/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:11540961/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:26055227/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:30222873/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:27480134/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:23199303/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:6771321/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:44464089/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:33553524/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:7393730/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:7551445/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:8490265/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:10660973/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:37537238/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:15969597/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:15645552/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:13656383/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT > 1:36254880/1‑68 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTC > 1:41402798/1‑64 AGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATATCCATT > 1:20744301/1‑68 AGCAACCGGCGCACGATGAACATGAGTAAGCGTTAACGTATCGGCATAATGGGCGTGATATGTCCATT > 1:5376658/1‑68 GCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATT < 1:47215590/67‑1 AACCGGCGCACGATGAAGATGCGTACGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTA < 1:29819399/66‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATG < 1:49231789/68‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:23992704/67‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:50908476/67‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:21112010/67‑1 AACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTAT < 1:17245443/67‑1 CCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCC < 1:48417413/68‑1 CCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCC > 1:42845007/1‑68 CCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCC < 1:40358143/68‑1 CCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCC < 1:8995363/68‑1 CGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG < 1:25262898/68‑1 ACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACG < 1:26517383/67‑1 ACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACG < 1:32474958/67‑1 ACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACG < 1:13138834/67‑1 TGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAA < 1:25638521/67‑1 GAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACG < 1:14129528/68‑1 AAGCGTTAACGTAACGGCATAATGGGCGTTATATGTCCATTATGCCGTTACGTTAACGCTTACTCA < 1:14626425/66‑1 AAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCGTTACGTTAACGCTTACTCA < 1:9307513/66‑1 AAGCCTTAACGAAACGGCATAATGGGCGGGATAGGTCCATAAAGCCGTTACGTTAACGCTTACTCATC < 1:29280380/68‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:19478299/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA > 1:11746650/1‑67 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA > 1:10006281/1‑67 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:43354933/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:30529199/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:49979326/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:16581289/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA < 1:22383447/67‑1 CCATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAA > 1:1142768/1‑67 ATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCA < 1:24483495/68‑1 ATTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCA < 1:43793041/68‑1 TTATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAAAGCGAACCAG > 1:357522/1‑68 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:46011308/68‑1 TATGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGA < 1:18690835/68‑1 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:38758881/1‑68 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATC > 1:45002282/1‑68 TGCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACA > 1:22040947/1‑54 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:22846424/1‑68 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA < 1:5159697/68‑1 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:48559792/1‑68 GCCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:36004346/1‑68 GCCGGTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA < 1:44736123/68‑1 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:28704493/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:17859331/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:24856605/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:31459008/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:32897219/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:34017949/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:36567538/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:35414862/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:5954093/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:11008654/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGAGAACCAGATCA > 1:18862155/1‑67 CCGTTACGTTAACGCTTACTCATCTTCATCCTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCA > 1:48223196/1‑67 CGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC < 1:16200247/68‑1 CGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC < 1:47583891/68‑1 CGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC < 1:47034663/68‑1 CGTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAC > 1:34837884/1‑68 GTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAAa > 1:41743050/1‑66 AAAGAGCAACCGGCGCACGATGAAGATGAGTAAGCGTTAACGTAACGGCATAATGGGCGTGATATGTCCATTATGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/1894318‑1894241‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccattatgccgTTACGTTAACGCTTACTCATCTTCATCGTGCGCCGGTTGCTCTTTAACAATGCGAACCAGATCAACA > CP009273/1894274‑1894340 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |