| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2724774 = | NA (NA) | 3 (0.010) | 3/108 | NT | 100% | intergenic (‑258/+185) | rrsG/clpB | 16S ribosomal RNA of rrnG operon/protein disaggregation chaperone |
| ? | CP009273 | = 4028728 | 0 (0.000) | intergenic (+215/‑163) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
Only 100 of 132 total aligned reads displayed.
CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGtc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2724839‑2724774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < CP009273/4028728‑4028661 caaGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:29627315/4‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:34022349/1‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC < 1:9094523/68‑1CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:19992440/1‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:20005123/1‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC < 1:37147717/68‑1CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:2447417/1‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC < 1:4720678/68‑1CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC < 1:12107597/68‑1CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC > 1:49251316/1‑68CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGT < 1:34756461/67‑1 AGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA > 1:31877284/1‑68 AGGCCGGAATAACTCCCTAAAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTC < 1:45498621/67‑1 GGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA > 1:1315905/1‑67 GGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA > 1:44996812/1‑67 GGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA > 1:10360056/1‑67 GCCGGAATAACTCCCTATAAAGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:17175059/68‑1 CCGGAATACCTCACTATAATGCGCCACCACTGCCACGGCACAACGGCAAACACGCCGCCGGGTCAGCG > 1:25725390/1‑68 CCGGAATAACTGCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:36496291/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGCCACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:42175081/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACCCGGAACAACGGCAAACACGCCGCCGGGTAAGCG > 1:35761532/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACCCGCCGCCGGGTCAGCG > 1:5379592/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:34207127/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:29070730/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:50814576/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:49772586/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:32234135/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:47602653/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:47175576/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:33183498/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:46844638/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:5085844/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:46781768/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:46333472/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:45564234/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:39059347/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:39187547/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:44125837/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:43990986/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:43378434/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:15383626/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:11399389/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:6453851/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:21811837/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:23102588/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:2159966/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:27206963/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:26026475/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:11588548/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:17179063/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:11663816/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:1632947/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCG > 1:12823172/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:18084410/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:12899131/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:49530005/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:37500447/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:9742206/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:9172925/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:22852873/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:33634764/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:23770565/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:22103526/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:31693382/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:30940320/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:30830578/67‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAG < 1:26116237/66‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:46717432/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:34104168/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:23582009/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:40373623/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:29538827/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:10574879/65‑1 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGCGTCAGCG > 1:46391272/1‑68 CCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAAAACGCCGCCGGGTCAGCG > 1:32397549/1‑68 CCGGAATAACTCCCTATAAAGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCA < 1:19350587/65‑1 CCGGAAAAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGC < 1:20620012/67‑1 CGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGG > 1:17126543/1‑68 ATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACTCGCCGCCGGGTCACCGGCGt > 1:22706605/1‑66 AATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGT > 1:26876662/1‑46 ACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGCGCGGGGTGTTCATAATTCGCCTGCCC > 1:37452240/1‑68 ACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGCGCGGGGTGTGCATAATACGCTTTCCC < 1:43067639/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:50928502/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:16201608/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:17054240/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:43509129/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:41330349/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:51278130/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:26669537/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:9928105/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:39648111/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:36765189/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:33449923/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:19621352/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:157422/1‑65 TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGGCAAGCATTTA‑TTTTTGCTTTCTCT < 1:1398598/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTACCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:8983386/68‑1 TCAGCGGCGCGGGGTGTGCATAATACGCCTACCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTC > 1:10414617/1‑65 TCAGCGCCGCGGGGTGTGCATATTACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < 1:22199131/68‑1 CAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTATTTTTTGCTTTCTCT < 1:8036784/68‑1 CAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGtc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2724839‑2724774‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCGGCGCGGGGTGTGCATAATACGCCTTCCCGCTACAGAGTCAAGCATTTA‑TTTTTGCTTTCTCT < CP009273/4028728‑4028661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |