| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 16 (0.030) | 7/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 285 total aligned reads displayed.
TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925252‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGC < 1:8624478/68‑1 TGTAGAGCTTTACCATACCTCCTGGTAAATGCGCGGATGGGATAATGCCGGATACGACGTTTGCGGCG < 1:33331095/68‑1 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG < 1:24423666/68‑1 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG > 1:12324811/1‑68 TGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCG < 1:38152782/68‑1 gaAGAGCTTAACCAAACCGCCTCGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:5850809/66‑1 GTAGAGCTTTACCATGCCGCCTGGTAAATGCGCTGCTAAGGTAATGCCGGATACGACGTTTGCGGCGT > 1:48041238/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:2726780/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:4532287/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:40933962/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:40804428/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:4769176/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:49480709/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:50300737/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:5729041/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:15695135/68‑1 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:8409386/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:12966251/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:1124223/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT > 1:30993326/1‑68 GTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:3184182/68‑1 TAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:14601984/1‑68 TAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:46683102/1‑68 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTAT < 1:32437751/68‑1 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:32865051/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:28163897/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:37351220/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:35305459/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:40584901/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:23522899/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:14523560/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:7359476/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:13301803/1‑67 AGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTA > 1:10682155/1‑67 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:15301449/1‑68 AGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCC > 1:9516498/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:42966366/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:4216340/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:46014087/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:48594633/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:48868899/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:6636573/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:37187803/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:8938545/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:9684626/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:30794477/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:23656892/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:16549928/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:15410898/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:26667790/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:22804890/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:14154447/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:22055632/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:11498299/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:18417850/1‑68 GCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:10150171/1‑68 GCTTTACCATACAGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:44530394/1‑68 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC < 1:26116597/68‑1 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGG < 1:3006296/67‑1 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:34565150/1‑66 TTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCG > 1:42256234/1‑66 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:18789462/68‑1 CCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTA < 1:41682312/68‑1 GTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGT < 1:36939662/45‑1 aAAATCCGCTGATGAGATAATGCCGGATACGACGTTTCCGGCGTATCCGGCATTATCACATCAGCGC < 1:17693852/66‑1 TAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGC < 1:45859047/67‑1 TAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGC < 1:49999817/67‑1 TAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGC < 1:3275612/67‑1 TAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGCATTATCACATCAGCGC < 1:25349028/67‑1 GTGATAATCCCGCAAACGACGGGAGCGGCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGT < 1:10933424/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:5478854/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:49059310/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:43794184/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:64115/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:40335963/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:7601449/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC < 1:29119808/68‑1 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGC > 1:34057478/1‑68 CGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAG < 1:30407020/67‑1 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:51046342/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:13859286/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:22868962/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:46380651/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:46313641/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:24798261/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:25673482/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:39261816/1‑67 TCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:27101353/1‑67 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCACGCGTT > 1:15921549/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGC < 1:47105193/68‑1 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGC < 1:39982985/68‑1 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:10082107/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:50624588/1‑66 CCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTT > 1:51298948/1‑66 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:41424189/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:33782861/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:36787996/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:3950133/1‑68 GCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:20590381/1‑68 CATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > 1:18087223/1‑67 TTGTAGAGCTTTACCATACCGCCTGGTAAATGCGCTGATGTGATAATGCCGGATACGACGTTTGCGGCGTATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP009273/2925252‑2925176‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtatccggcATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAAGCTCTACAATATCCTCAAGCGTTGCTTC > CP009273/2925206‑2925271 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |