| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2925176 = | NA (NA) | 16 (0.030) | 7/92 | NT | NA | noncoding (1/30 nt) | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP203 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | CP009273 | 2925206 = | NA (NA) | intergenic (+37/+18) | ygdG/fucO | Ssb‑binding protein, misidentified as ExoIX/L‑1,2‑propanediol oxidoreductase | |||||
Only 100 of 791 total aligned reads displayed.
CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 | gaagcaacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGc > 1:27522171‑M1/67‑68 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTTGTACGGTAACGGCGAGc < 1:29007519/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:26339720/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:31989960/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:18502791/68‑1 (MQ=255) cGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGc < 1:15402196/68‑1 (MQ=255) aactcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:30404571‑M1/62‑67 (MQ=255) aacgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGa > 1:9135239‑M1/62‑67 (MQ=255) acgcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATa > 1:12497849‑M1/61‑68 (MQ=255) gcttgaggatattgtagagctttaccatagcgcctggtaaatgcgctgatgtgataatGCCGGATAcg > 1:44053073‑M1/59‑68 (MQ=255) gcttgaggatattgtagagctttaccataccgcctggtaaatgcgctgatgtgataatGCCGGATAcg > 1:42215775‑M1/59‑68 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACTGTAACGGCGAGCCCGATaag > 1:2342490/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:34371479/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:25432337/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcg > 1:23789425/1‑67 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATaac > 1:49208424/1‑65 (MQ=255) aCCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATAcg > 1:16365469/1‑67 (MQ=255) cGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAcgccg < 1:8474146/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:32460508/68‑1 (MQ=255) gCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcg < 1:44838082/68‑1 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtg > 1:34870283/1‑67 (MQ=255) atatCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACCCCGCAAAcggc > 1:26667381/1‑66 (MQ=255) atCGACGGCATTTTACAGCAATTGCGGTGGGTACGGTCACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:37885749/68‑1 (MQ=255) atCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAcgtcgt < 1:3393720/68‑1 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATTACCCGCAAACCTCGTa > 1:50887528/1‑67 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTAt < 1:38360668/68‑1 (MQ=255) cGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACCCCGCAAACCTCGTAt > 1:39699814/1‑68 (MQ=255) aCGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAAAGTCGTATcc > 1:1045826/1‑68 (MQ=255) gCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACGCCGCAAACGTCGTATCCGGc > 1:5127635/1‑68 (MQ=255) cAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGc < 1:43413922/67‑1 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTTTCCGGCAt > 1:24885883/1‑68 (MQ=255) aaTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCa < 1:20608285/67‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCAtt < 1:45920393/68‑1 (MQ=255) aTTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCC‑GATACGCCGCAAACGTCGTATCCGGCATTa < 1:10009048/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:48143316/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:35408466/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:16716825/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:39447283/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:40241072/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:19630748/68‑1 (MQ=255) tttACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:12968785/68‑1 (MQ=255) cataccgcctggtaaatgcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTa < 1:13810184‑M1/34‑1 (MQ=255) tACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATc < 1:2293585/68‑1 (MQ=255) aCAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTGTCCGGCATTATc > 1:31439416/1‑67 (MQ=255) accgcctggtaaatgcgctgatgtgataatGCCGGATTCGCCGCAAACGGGGTATCCGGGAttatgac < 1:32739356‑M1/38‑4 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTTTCACAt > 1:14738145/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATACGGCATTATAACAt > 1:6338430/1‑68 (MQ=255) gCAATTGCGGTTGGTACGGTAACGGCGAGCCCGATACCCCCCAAACGTCCTATACGGCCTTATcaca > 1:7961863/1‑67 (MQ=255) aaTTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATcaca < 1:43006247/65‑1 (MQ=255) tGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcg < 1:22016687/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:19173187/68‑1 (MQ=255) gCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:6676725/68‑1 (MQ=255) gCGGTTGGGACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAgcgc < 1:29329606/68‑1 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt > 1:9413952/1‑68 (MQ=255) ttGGTACGGTAACGGCGAGCCGGATAAGCCGCAAACGTCGTATCCGGCAATATAACATCAGCGCAatt > 1:33628769/1‑68 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCAttt < 1:41680352/67‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:15888340/68‑1 (MQ=255) tGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:4667473/68‑1 (MQ=255) gcgctgatgtgataatGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTa < 1:49999817‑M1/51‑1 (MQ=255) aCGGTAACGGCGAGCCGGATACGCCGCAATCGTCGTATCCGGCATTATCACATCAGCGCATTTACCAg < 1:11125537/68‑1 (MQ=255) ggTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGc < 1:27017066/68‑1 (MQ=255) tAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCg < 1:5475116/67‑1 (MQ=255) aaCGGCGAGCGGGATACGCCGCTAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:19927475/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCTGt < 1:47706759/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:13199031/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:48524299/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:40572246/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:7460059/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:45345581/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:50326658/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:47191167/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:49428142/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:43810142/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:40834268/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:22599571/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:21367550/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:28628162/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:38972040/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:18089768/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3320934/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:37304874/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:16993027/68‑1 (MQ=255) aaCGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGt < 1:3625143/68‑1 (MQ=255) cGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTAt < 1:17435538/68‑1 (MQ=255) ggCGAGCCGGATTCGCCGCATACGTCGTATGCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:24340555/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCGGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:39965404/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACCTCAGCGCATTTACCAGGCGGTATg < 1:10778362/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:11506282/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:7071208/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:25825245/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg < 1:8779763/68‑1 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATg > 1:41303249/1‑68 (MQ=255) ggCGAGCCGGATACGCCGCAAACGTCGTATACGGCATTATAACATCAGCGCATTTACCAGGCGGTATg > 1:46353493/1‑68 (MQ=255) ggCGAGCCCGATACGCCGCAAACGTCGTATACGGCATTATAACATCAGCGCATTTTCCAGGCGGTATg > 1:14306540/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCCGCGCATGTAGCAGGGGGTATGGt > 1:37685606/1‑68 (MQ=255) cGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGGGGGATggg > 1:2789667/1‑67 (MQ=255) cGAGCCGGATAAGCCGCAAACGTGGTATACGGGATTATAACATAAGCGCATTTTACAGGCGGGATGGt > 1:38608781/1‑68 (MQ=255) cGAGCCCGATACCCCGCAAACGTCGTATCCCGCATTATAACAACAGCGCATTTACCAGGCGGGATGGt > 1:48756632/1‑68 (MQ=255) gAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGt < 1:5691012/67‑1 (MQ=255) GCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTaaa < 1:3687279‑M1/68‑1 (MQ=255) | CCGCTTACAAACCGATTTGCATATCGACGGCAATTTACAGCAATTGCGGTTGGTACGGTAACGGCGAGCCGGATACGCCGCAAACGTCGTATCCGGCATTATCACATCAGCGCATTTACCAGGCGGTATGGTAAA > CP009273/2925109‑2925243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |