| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 3832491 = | 541 (0.870) | 26 (0.050) | 7/96 | NT | 6.7% | coding (884/924 nt) | yicL | EamA family inner membrane putative transporter |
| ? | CP009273 | 3832524 = | 257 (0.480) | coding (917/924 nt) | yicL | EamA family inner membrane putative transporter | |||||
Only 100 of 720 total aligned reads displayed.
TACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832425‑3832558 | agtcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatg > 1:1405913‑M1/67‑67 (MQ=255)agtcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatg < 1:44032408‑M1/1‑1 (MQ=255)agtcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatg < 1:50267333‑M1/1‑1 (MQ=255) tcgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGcc < 1:6151043‑M1/3‑1 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:24067639/1‑67 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:27885249/1‑67 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:38546615/1‑67 (MQ=255) ccGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgcc > 1:5702998/1‑67 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:4491094‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:42377374‑M1/64‑68 (MQ=255) cgctaaagcggcagaaaccatttttaacggtggcgcggtgcctggctggtaattctcacttatGCcgc > 1:13238110‑M1/64‑68 (MQ=255) cGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc < 1:31172146/68‑1 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:8746220/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:47265165/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:522369/1‑67 (MQ=255) ggACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTcgccgc > 1:1481442/1‑67 (MQ=255) gctaaagcggcagaaaccatttttaacgggggcgcggggcctggctggtaattctcacttatGCcgc > 1:12342847‑M1/63‑67 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:41730513/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:26245915/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:27202248/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:7516281/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:30402905/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:32735962/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:35634611/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:36066564/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:42038363/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:4373878/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:10400109/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:46086280/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:48216581/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:48558302/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:15992903/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:13695780/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:10113573/1‑68 (MQ=255) aCTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGcc > 1:15714124/1‑68 (MQ=255) ggctggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGa > 1:49801428/1‑68 (MQ=255) ctggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa > 1:718754/1‑68 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:12690746/67‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:23572649/67‑1 (MQ=255) tggGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaa < 1:39640499/67‑1 (MQ=255) gggAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGaaaaa > 1:50720882/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCATAAaaataa > 1:26516290/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:9318635/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:36768813/1‑68 (MQ=255) aaCGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAaaataa > 1:7744957/1‑68 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAACTCGTCCGgc < 1:34266324/67‑1 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:20553812/1‑67 (MQ=255) ttCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgc > 1:31412021/1‑67 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg < 1:38012429/68‑1 (MQ=255) cTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGcgcg > 1:38903028/1‑68 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:4655504/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:49257905/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:42919308/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:40267476/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc < 1:28631228/68‑1 (MQ=255) gTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAAACGTCCGGCGCGGc < 1:9046941/68‑1 (MQ=255) tCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCa > 1:2752928/1‑68 (MQ=255) cATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCAt > 1:29994915/1‑68 (MQ=255) aTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATa < 1:29438189/68‑1 (MQ=255) aTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATa > 1:685533/1‑68 (MQ=255) tCGGTGATTTTGATATCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATaa < 1:33362048/68‑1 (MQ=255) cGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAg < 1:19193858/68‑1 (MQ=255) ggTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGt < 1:46910425/68‑1 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:45726082/1‑68 (MQ=255) gTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTg > 1:33519830/1‑68 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATATGTgag < 1:15524693/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:19972892/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:22635285/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:35112591/68‑1 (MQ=255) gattttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTgag < 1:11611079/68‑1 (MQ=255) tttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAt > 1:34590634/1‑68 (MQ=255) tttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAt > 1:15278794/1‑68 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:17962542/68‑1 (MQ=255) ttgatttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt < 1:18140848/68‑1 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAgaatttcc < 1:26870150‑M1/49‑4 (MQ=255) gctggtaattctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcc < 1:37445403‑M1/49‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:41165296/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:45204071/68‑1 (MQ=255) tttCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAcca < 1:14345237/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTCccagc < 1:21765664/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:25112772/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:32325338/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:17245042/68‑1 (MQ=255) tCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagc < 1:18676838/68‑1 (MQ=255) aaTGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagcca < 1:39259131/68‑1 (MQ=255) aTGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagccag > 1:31717966/1‑68 (MQ=255) ctcacttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:29159973‑M1/58‑1 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:16240976/67‑1 (MQ=255) aTTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCa < 1:8371356/67‑1 (MQ=255) cttatGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgc < 1:21119721‑M1/62‑1 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:23891000/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:9694500/1‑67 (MQ=255) cGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACcgcg > 1:16679657/1‑67 (MQ=255) cgccgcGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAc < 1:18423896/68‑1 (MQ=255) cgccgcGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAc < 1:19528027/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:43230863‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc > 1:40136458‑M1/1‑68 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc > 1:28302995‑M1/1‑68 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:23116766‑M1/68‑1 (MQ=255) GCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCAcc < 1:25648945‑M1/68‑1 (MQ=255) | TACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCCAGGCACCGCGCCACC > CP009273/3832425‑3832558 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |