New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4306574 =214 (0.350)11 (0.020) 9/98 NT 5.0% coding (462/1137 nt) phnM ribophosphonate triphosphate hydrolase
?CP009273 4306632 = 230 (0.420)coding (404/1137 nt) phnM ribophosphonate triphosphate hydrolase

Only 100 of 408 total aligned reads displayed.

CTCGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGAC  >  CP009273/4306508‑4306641
                                                                  |                                                                   
ctcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    <  1:28648099/68‑1 (MQ=255)
ctcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    <  1:29869613/68‑1 (MQ=255)
ctcGCGGTTGGCGAACAGGCGCGGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    <  1:36881098/68‑1 (MQ=255)
 tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgcg                                                                   <  1:42780720/68‑1 (MQ=255)
 tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgcg                                                                   <  1:8104181/68‑1 (MQ=255)
 tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgcg                                                                   <  1:36555865/68‑1 (MQ=255)
 tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgcg                                                                   <  1:18037701/68‑1 (MQ=255)
 tcGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    >  1:5667317/1‑67 (MQ=255)
 acgaagaagagcaactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    >  1:11665127‑M2/23‑67 (MQ=255)
  tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc                                                                    >  1:25157365‑M1/65‑66 (MQ=255)
  tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc                                                                    >  1:5215255‑M1/65‑66 (MQ=255)
  tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc                                                                    >  1:50357976‑M1/65‑66 (MQ=255)
  tgatcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctgc                                                                    >  1:11055711‑M1/65‑66 (MQ=255)
  cgcgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    >  1:33068531/1‑66 (MQ=255)
   gcgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    >  1:2261740/1‑65 (MQ=255)
   gaagaagagcaactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTcgc                                                                    >  1:37330877‑M2/21‑65 (MQ=255)
    cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCGCCGGCTCGCGCt                                                                 >  1:21861089/1‑67 (MQ=255)
    cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt                                                                 >  1:30762189/1‑67 (MQ=255)
    cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt                                                                 >  1:3841090/1‑67 (MQ=255)
    cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt                                                                 >  1:5445333/1‑67 (MQ=255)
    cgGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCt                                                                 >  1:16581534/1‑67 (MQ=255)
     tcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGc                                                               <  1:15528046‑M1/7‑1 (MQ=255)
     tcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGc                                                               >  1:7475892‑M1/62‑68 (MQ=255)
     tcaacgccatcgaagagacgcagaaacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGc                                                               >  1:17598355‑M1/62‑68 (MQ=255)
     ggTTGGCGAACTGGCGCTTGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:47514044/68‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTg                                                                <  1:11988048/67‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:35000808/68‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:43093764/68‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               >  1:45705524/1‑68 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:6145719/68‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:45263958/68‑1 (MQ=255)
     ggTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               <  1:38707910/68‑1 (MQ=255)
      gTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               >  1:14879034/1‑67 (MQ=255)
      gTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGc                                                               >  1:40631774/1‑67 (MQ=255)
            gAACTGGCGCTGGCCCGGCGAGGGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGt                                                         <  1:40380808/67‑1 (MQ=255)
             aactggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       >  1:39642104‑M2/11‑68 (MQ=255)
              actgtcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       <  1:25308485‑M2/58‑1 (MQ=255)
              actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       <  1:39412727‑M2/58‑1 (MQ=255)
              actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       <  1:41480485‑M2/58‑1 (MQ=255)
              actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       <  1:20695121‑M2/58‑1 (MQ=255)
              actggcgctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGttt                                                       <  1:20072543‑M2/58‑1 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCaaa                                                 <  1:33306348‑M2/64‑1 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCaaa                                                 <  1:8299448‑M2/64‑1 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCaaa                                                 <  1:24238543‑M2/64‑1 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAAc                                                >  1:19321059‑M2/4‑68 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAAc                                                >  1:44394196‑M2/4‑68 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAAc                                                >  1:41711933‑M2/4‑68 (MQ=255)
                    gctGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAAc                                                >  1:15911165‑M2/4‑68 (MQ=255)
                      tGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACa                                               <  1:18650045‑M2/66‑1 (MQ=255)
                        gCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCg                                            >  1:8503728/1‑68 (MQ=255)
                         cccGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCg                                            >  1:24031383/1‑67 (MQ=255)
                         cccGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCg                                            >  1:50852250/1‑67 (MQ=255)
                         ccaggCGAGTGGTCCATCCGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCg                                            >  1:7101527/4‑67 (MQ=255)
                             aacgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGc                                       >  1:48933074‑M1/38‑68 (MQ=255)
                              cGAGTGGTCCATCAGCGCCACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAACCAGCGGCAGCg                                      >  1:5063507/1‑68 (MQ=255)
                              cGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGc                                       <  1:29082029/67‑1 (MQ=255)
                              cGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCg                                      >  1:12850364/1‑68 (MQ=255)
                              cGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCg                                      >  1:6599337/1‑68 (MQ=255)
                              cGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCg                                      >  1:27297791/1‑68 (MQ=255)
                               cgcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgt                                     >  1:13767896‑M1/36‑68 (MQ=255)
                                gcggcgtcaaccgcgccgagcaccgtctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtg                                    >  1:45503477‑M1/35‑68 (MQ=255)
                                aGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtg                                    >  1:51115423/1‑68 (MQ=255)
                                   ggTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtggtg                                 >  1:483269/1‑68 (MQ=255)
                                   ggTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtggt                                  <  1:23825343/67‑1 (MQ=255)
                                   ggTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCgtggt                                  <  1:22188919/67‑1 (MQ=255)
                                    gTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGgtgt                                >  1:13359405/1‑68 (MQ=255)
                                       cATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGAt                             <  1:24857002/68‑1 (MQ=255)
                                        aTCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGAt                             >  1:41958922/1‑67 (MQ=255)
                                          cAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:10075418/1‑68 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:43808329/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:8980005/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:31565288/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:10458394/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:14212605/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:19113684/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:2160943/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:25867354/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:26428121/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:42239353/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:32328498/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:34093405/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCg                          >  1:38036308/1‑67 (MQ=255)
                                           aGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGAGGTGTGATGCg                          >  1:12403824/1‑67 (MQ=255)
                                             cGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCa                       >  1:41042138/1‑68 (MQ=255)
                                                 acCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc                   >  1:31014050/1‑68 (MQ=255)
                                                  ccAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTc                   >  1:16210336/1‑67 (MQ=255)
                                                   cAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgc                 >  1:3990312/1‑68 (MQ=255)
                                                      cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc              >  1:35867584/1‑68 (MQ=255)
                                                      cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc              >  1:27970924/1‑68 (MQ=255)
                                                      cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc              >  1:17065358/1‑68 (MQ=255)
                                                      cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGAGGCAGTTcgcagc              >  1:44949626/1‑68 (MQ=255)
                                                      cGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGGGTGATGCGGCAGTAcgcagc              >  1:27805110/1‑68 (MQ=255)
                                                       gTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc              <  1:4397666/67‑1 (MQ=255)
                                                       gTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagc              >  1:22916024/1‑67 (MQ=255)
                                                           tgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa         >  1:30451938‑M1/8‑68 (MQ=255)
                                                           ccGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa         >  1:35345503/1‑68 (MQ=255)
                                                            cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt        >  1:46505023/1‑68 (MQ=255)
                                                             ggCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATg       <  1:46216410/68‑1 (MQ=255)
                                                               cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGc      >  1:37532653/1‑67 (MQ=255)
                                                                tCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAg    >  1:49874333/1‑68 (MQ=255)
                                                                  |                                                                   
CTCGCGGTTGGCGAACTGGCGCTGGCCCGGCGAGTGGTCCATCAGCGACACCAGCGTCACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGAC  >  CP009273/4306508‑4306641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.