| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4306574 = | 214 (0.350) | 11 (0.020) | 9/98 | NT | 5.0% | coding (462/1137 nt) | phnM | ribophosphonate triphosphate hydrolase |
| ? | CP009273 | 4306632 = | 230 (0.420) | coding (404/1137 nt) | phnM | ribophosphonate triphosphate hydrolase | |||||
Only 100 of 366 total aligned reads displayed.
CACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306565‑4306698 | tctgcatctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTcgcagcgca < 1:49505806‑M1/59‑1 (MQ=255) ccGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa > 1:35345503/1‑68 (MQ=255) ccGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGa > 1:35164059/1‑68 (MQ=255) cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:42091517/1‑68 (MQ=255) cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:39939147/1‑68 (MQ=255) cGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGAt > 1:46505023/1‑68 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:38440722‑M1/65‑1 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:45927757‑M1/65‑1 (MQ=255) tctGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa < 1:47492206‑M1/65‑1 (MQ=255) cTCGCGCTGCACCAGTTTTTCAACCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCCGCGCAGATGCa > 1:26481810/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGc > 1:37532653/1‑67 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:37588050/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:25862111/1‑68 (MQ=255) cTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCa > 1:5244535/1‑68 (MQ=255) tCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAg > 1:10223326/1‑68 (MQ=255) GCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACgg < 1:31160166‑M1/68‑1 (MQ=255) GCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACgg < 1:46224569‑M1/68‑1 (MQ=255) GCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACgg < 1:11937974‑M1/68‑1 (MQ=255) GCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACgg < 1:11337706‑M1/68‑1 (MQ=255) CTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGt < 1:51008157‑M1/68‑1 (MQ=255) GCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGt < 1:34123717‑M1/66‑1 (MQ=255) aCCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTc > 1:48490335/1‑68 (MQ=255) aCCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTc > 1:26070294/1‑68 (MQ=255) aCCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTc > 1:20758749/1‑68 (MQ=255) aCCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTc > 1:17580508/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:19988990/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:23385492/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:12699057/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:38995082/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:4178293/1‑68 (MQ=255) tttttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGgcgc > 1:41225904/1‑68 (MQ=255) ttCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGt < 1:46747041/68‑1 (MQ=255) aaaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTg > 1:43190997/1‑67 (MQ=255) aaaCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTg > 1:14277400/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:9137281/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:602004/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:638077/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGAc > 1:49243007/1‑67 (MQ=255) aCAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGATCGGCGCGGTTGAc > 1:15934071/1‑67 (MQ=255) cacgctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGAcgccgc > 1:45503477‑M2/35‑68 (MQ=255) ctgccgctgtttgaaaaactggtgcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:3031723‑M2/31‑67 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:28202269/1‑67 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:31468992/1‑67 (MQ=255) aGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt < 1:38798404/67‑1 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:28552103/1‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:17354600/1‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:3215727/1‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:21418983/1‑65 (MQ=255) cGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGtt > 1:36319107/1‑65 (MQ=255) tgtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCg > 1:50045561/1‑66 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtct < 1:41719984/68‑1 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtct < 1:21882469/68‑1 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:13748086/1‑67 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:25740198/1‑67 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:21216053/1‑67 (MQ=255) gtgATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGtc > 1:4303633/1‑67 (MQ=255) gATGCGGCATTTCGCAGCGCAGATGCAGACGGTGCTCGGCTCGGTTGACGCCGCGTTTCTGCGTctct < 1:39568791/68‑1 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:24605955/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct < 1:16695567/68‑1 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:3239041/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct < 1:47260237/68‑1 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct > 1:5335220/1‑68 (MQ=255) gATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTctct < 1:14948290/68‑1 (MQ=255) tGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTc > 1:39737074/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:7734919/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:10061085/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:9479657/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:5587588/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:40556604/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:36713605/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:18214539/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:25008856/1‑68 (MQ=255) gCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCg > 1:1765653/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:44073185/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:21946915/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:13182622/1‑68 (MQ=255) ggCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGAt > 1:33697712/1‑68 (MQ=255) cAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATg > 1:34577749/1‑67 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATgg < 1:42857213/67‑1 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:18828315/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:1971573/1‑68 (MQ=255) aGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc > 1:31771008/1‑68 (MQ=255) ttCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGt > 1:29416386/1‑68 (MQ=255) ttCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGt > 1:44883932/1‑68 (MQ=255) tCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc < 1:6762448/65‑1 (MQ=255) tCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGc < 1:39179435/65‑1 (MQ=255) tCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGGTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGtt < 1:30931991/68‑1 (MQ=255) gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGCTGGCGTTGa > 1:33245025‑M2/8‑68 (MQ=255) gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGa < 1:15528046‑M2/61‑1 (MQ=255) gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGa > 1:7475892‑M2/8‑68 (MQ=255) gcagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGa > 1:50937696‑M2/8‑68 (MQ=255) cagcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGa > 1:27884678‑M2/7‑67 (MQ=255) tgcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatc > 1:40902374‑M2/6‑68 (MQ=255) agcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatc > 1:24118005‑M2/6‑68 (MQ=255) agcgcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatc > 1:47698348‑M2/6‑68 (MQ=255) gcAGATGCAGTCGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:12157528‑M2/3‑66 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:25157365‑M2/3‑66 (MQ=255) gcAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGatca > 1:11055711‑M2/3‑66 (MQ=255) agATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAtct < 1:32801142/67‑1 (MQ=255) agATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCAtct < 1:45597237/67‑1 (MQ=255) | CACCGGCTCGCGCTGCACCAGTTTTTCAAACAGCGGCAGCGTGGTGTGATGCGGCAGTTCGCAGCGCAGATGCAGACGGTGCTCGGCGCGGTTGACGCCGCGTTTCTGCGTCTCTTCGATGGCGTTGATCATCT > CP009273/4306565‑4306698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |