New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =460 (0.740)25 (0.050) 8/100 NT 5.7% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 417 (0.750)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 620 total aligned reads displayed.

CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835
                                                                  |                                                                   
cagacctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagc                                                                    >  1:26803629‑M1/67‑68 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 <  1:2156940/67‑1 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:39421577/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:16522928/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:37007737/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:34188264/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:30951466/1‑67 (MQ=255)
    gATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggc                                                                 >  1:11749014/1‑67 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcggcg                                                                <  1:44266476‑M1/6‑1 (MQ=255)
    cctggattggcgtgcctggcgtggaccagagccgtattgaagcattaattcagcagttaaaagcgg                                                                  >  1:2431713‑M1/63‑66 (MQ=255)
     aTGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgc                                                               >  1:19958597/1‑68 (MQ=255)
     aTGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgc                                                               >  1:43021107/1‑68 (MQ=255)
      tGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATAcgcggcgcg                                                              >  1:31611243/1‑68 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaa                                                           <  1:39011225/68‑1 (MQ=255)
         tCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGa                                                            <  1:12073136/67‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:1004845/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:36525699/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:30319639/68‑1 (MQ=255)
          cAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGaaa                                                          <  1:7910866/68‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:20621802/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:12540149/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAtt                                                        <  1:6710231/66‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAAt                                                         <  1:23343951/65‑1 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:47638373/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:49232146/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:23717259/1‑68 (MQ=255)
              cGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTaa                                                      >  1:14175027/1‑68 (MQ=255)
               gCTGACGCTCCAGAGCAATCAAACGCTCTTCACGCAGAAATTGCCCGATACGCGGCGCGCATATTAAt                                                     >  1:28867241/1‑68 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:36043057/1‑66 (MQ=255)
                   aCGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATAc                                                   >  1:874676/1‑66 (MQ=255)
                       aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:32411609/1‑67 (MQ=255)
                       aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              <  1:35265692/67‑1 (MQ=255)
                       aCCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcc                                              >  1:31433766/1‑67 (MQ=255)
                         cAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTcccc                                            >  1:1537908/1‑67 (MQ=255)
                          agagCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccg                                           >  1:15680095/1‑67 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:8370407/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:29161845/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:9369345/1‑66 (MQ=255)
                             gCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCccgcc                                         >  1:45509213/1‑66 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:28436804/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:2095600/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:18391621/66‑1 (MQ=255)
                               aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCcgccgc                                       <  1:46268576/66‑1 (MQ=255)
                               aaTCAAACGATAATCACGCAGAAATTGCACGAAACGCGGCGCGGAAAATAATAAGCACCCCCCCGCtt                                     >  1:34709379/1‑68 (MQ=255)
                                aTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCttt                                    <  1:4895373/68‑1 (MQ=255)
                                    aaCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:4249956/1‑66 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                  >  1:46596202/1‑65 (MQ=255)
                                     aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               <  1:25753026/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:41049600/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                             <  1:47937241/68‑1 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:37847195/1‑66 (MQ=255)
                                       gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                               >  1:5930490/1‑66 (MQ=255)
                                         tgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                           <  1:32122‑M1/43‑1 (MQ=255)
                                         tCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgctg                           >  1:7554920/1‑68 (MQ=255)
                                          cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                          <  1:1692360/68‑1 (MQ=255)
                                          cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                          <  1:25429719/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:43876508/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:650397/68‑1 (MQ=255)
                                           ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                         <  1:7238756/68‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGATATTAATACGCTCCCCGCCGCGTTTAACTGCTGAAt                        <  1:1126191‑M1/46‑1 (MQ=255)
                                            agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                        <  1:21125630‑M1/46‑1 (MQ=255)
                                              aCGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTa                      >  1:2404657/1‑68 (MQ=255)
                                               cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     >  1:17605499/1‑68 (MQ=255)
                                               attaattcagcagtttaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                     <  1:38149804‑M1/49‑1 (MQ=255)
                                                  aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                   <  1:27909850/67‑1 (MQ=255)
                                                     tcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTc               <  1:13629773‑M1/55‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:44836669/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:22800079/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:32939914/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:47053910/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:3370024/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:50183017/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:5293480/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:1446712/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:40775743/66‑1 (MQ=255)
                                                     aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:13252852/66‑1 (MQ=255)
                                                     aaTAGCCCGAAACGCGGCGCGGAAATTATTACGCTCCCAGCCGCTTTTAACTGCTGAATTAATGCt                 <  1:19453889/66‑1 (MQ=255)
                                                      aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa              <  1:17390513/68‑1 (MQ=255)
                                                      aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa              >  1:22649957/1‑68 (MQ=255)
                                                      aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa              >  1:48437290/1‑68 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:5112818/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:45883978/68‑1 (MQ=255)
                                                        tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt            <  1:16166204/68‑1 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:26977565/1‑68 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:40078698/1‑68 (MQ=255)
                                                          cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:37349422/1‑68 (MQ=255)
                                                          ccagATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc          >  1:2234054/4‑68 (MQ=255)
                                                             gATACGCTGCGCTGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTTAATTAATGCTTCAATACGGc       <  1:21951783/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:49440628/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:35609749/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:43607730/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:41584911/68‑1 (MQ=255)
                                                             gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       <  1:19002884/68‑1 (MQ=255)
                                                               tACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGct      <  1:14872410/67‑1 (MQ=255)
                                                                aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:3309970/1‑65 (MQ=255)
                                                                aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc       >  1:29827353/1‑65 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGGTTTTAACTGCTGAATTTTTGCTTCAATCCGGCTCTgg  <  1:24840663‑M1/68‑1 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:50728078‑M1/1‑68 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:23016150‑M1/1‑68 (MQ=255)
                                                                  GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg  >  1:27419391‑M1/1‑68 (MQ=255)
                                                                  |                                                                   
CTGGGATGCTCAGTCGCTGACGCACCAGAGCAATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGG  >  CP009273/108702‑108835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.