New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 108768 =460 (0.740)25 (0.050) 8/100 NT 5.7% coding (319/744 nt) zapD FtsZ stabilizer
?CP009273 108799 = 417 (0.750)coding (288/744 nt) zapD FtsZ stabilizer

Only 100 of 610 total aligned reads displayed.

AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866
                                                                  |                                                                   
aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCtt                                                                    >  1:23930562/1‑68 (MQ=255)
aaTCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCt                                                                     <  1:11364636/67‑1 (MQ=255)
   gccgtattgaagcattaattgagcagttaaaaGCGGCGCGGGAATTAATACGCTCCCCGCCGCGTTTa                                                                 <  1:25868293‑M1/36‑1 (MQ=255)
   gccgtattgaagcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGcgtttt                                                                 <  1:33755185‑M1/36‑2 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 <  1:1912013/68‑1 (MQ=255)
   cAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:23348225/1‑68 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:40980375/1‑65 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTa                                                                 >  1:24335448/1‑65 (MQ=255)
      aCGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              <  1:34842652/68‑1 (MQ=255)
       cGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:17331685/1‑67 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAActgc                                                            >  1:4679195/1‑68 (MQ=255)
        gATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAAct                                                              >  1:37847195/1‑66 (MQ=255)
           gaagcattaattcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGa                                                         <  1:13629773‑M2/13‑1 (MQ=255)
           cTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGa                                                         <  1:45360899/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:37343133/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        <  1:650397/68‑1 (MQ=255)
            ttCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGaa                                                        >  1:40376979/1‑68 (MQ=255)
             tCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:3042341/68‑1 (MQ=255)
             agcattaattcagcagttaaaaGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAAt                                                       <  1:4713261‑M1/46‑1 (MQ=255)
                cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                                                    >  1:28502461/1‑68 (MQ=255)
                cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                                                    >  1:23033323/1‑68 (MQ=255)
                cGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTaa                                                    >  1:17605499/1‑68 (MQ=255)
                 gCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAAt                                                   <  1:43000974/68‑1 (MQ=255)
                 gCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAAt                                                   >  1:2374089/1‑68 (MQ=255)
                   aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                                                  <  1:27909850/67‑1 (MQ=255)
                   aGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATg                                                  <  1:15158868/67‑1 (MQ=255)
                    attcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:39296450‑M2/22‑1 (MQ=255)
                    attcagcagttaaaagcggcggggagcgtattaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:1574952‑M2/22‑1 (MQ=255)
                    aatcagcagttaacagcggcggggagcgtataaatttccgcgccgcTTTTAACTGCTGAATTAATGCt                                                <  1:5382711‑M2/22‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:50183017/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:35686494/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:39692906/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:7594713/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:7106203/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:1446712/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:29342076/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:48625134/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:22800079/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCt                                                <  1:19824356/66‑1 (MQ=255)
                      aaTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACCGCTGAATTAATGCt                                                <  1:47760166/66‑1 (MQ=255)
                       aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             <  1:44550657/68‑1 (MQ=255)
                       aTTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCa                                             >  1:22649957/1‑68 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:8639092/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:5112818/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:32844405/68‑1 (MQ=255)
                         tGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAAt                                           <  1:7411026/68‑1 (MQ=255)
                          gCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATa                                          <  1:46445914/68‑1 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:16983005/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:26977565/1‑68 (MQ=255)
                           cccGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATAc                                         >  1:10475828/1‑68 (MQ=255)
                              gATACGCTGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:43854667/68‑1 (MQ=255)
                              gATACGCGGCGCTGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:21893989/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:36033137/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:12293830/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:41584911/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:43607730/68‑1 (MQ=255)
                              gATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      <  1:25103742/68‑1 (MQ=255)
                                tACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGct                                     <  1:14872410/67‑1 (MQ=255)
                                 aCGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGc                                      >  1:3309970/1‑65 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:50728078‑M1/1‑68 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:10848126‑M1/1‑68 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 <  1:29766220‑M1/68‑1 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:31473729‑M1/1‑68 (MQ=255)
                                   GCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTgg                                 >  1:31686191‑M1/1‑68 (MQ=255)
                                     GGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGt                                <  1:25470858‑M1/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:42067055/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:46126678/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:45760231/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:4896059/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:16784473/67‑1 (MQ=255)
                                          ggAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACg                           <  1:14145987/67‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCAc                   >  1:48088028/1‑67 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:5630555/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:44163693/68‑1 (MQ=255)
                                                  aTACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACg                  <  1:36919253/68‑1 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:20352763/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGcc                >  1:27647713/1‑68 (MQ=255)
                                                    aCGCTCCCCGCCGATTTTAAAAGCACAAGAAATGAATCAAAACGGCTCTGGTCCACGCCACGCACGcc                >  1:38660139/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:36389108/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:21308904/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              <  1:13160670/68‑1 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:262647/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:39182808/1‑68 (MQ=255)
                                                      gCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              <  1:34437371/68‑1 (MQ=255)
                                                      gCTCCCCGCCACTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCaa              >  1:1829330/1‑68 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:21111468/67‑1 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             >  1:38191429/1‑67 (MQ=255)
                                                        tCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAAt             <  1:9354061/67‑1 (MQ=255)
                                                         ccccGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACCCCAATca           >  1:22267244/1‑67 (MQ=255)
                                                            cgccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        <  1:3117122‑M2/62‑1 (MQ=255)
                                                             gccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:49268286‑M2/6‑67 (MQ=255)
                                                             gccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:12914816‑M2/6‑67 (MQ=255)
                                                              ccgcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAgg        >  1:35573779‑M2/5‑66 (MQ=255)
                                                                gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTg    >  1:20954242‑M2/3‑68 (MQ=255)
                                                                gcTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGTCTgg   >  1:34107597‑M2/3‑68 (MQ=255)
                                                                  ttttAACTGCTGCATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:49672085/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:30045200/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:16289885/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:15468879/68‑1 (MQ=255)
                                                                  ttttAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGa  <  1:11955168/68‑1 (MQ=255)
                                                                  |                                                                   
AATCAAACGATCTTCACGCAGAAATTGCCCGATACGCGGCGCGGAAATTAATACGCTCCCCGCCGCTTTTAACTGCTGAATTAATGCTTCAATACGGCTCTGGTCCACGCCAGGCACGCCAATCCAGGTCTGGA  >  CP009273/108733‑108866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.