| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1723413 = | 489 (0.790) | 22 (0.040) | 5/94 | NT | 5.8% | coding (70/4617 nt) | lhr | putative ATP‑dependent helicase |
| ? | CP009273 | 1723475 = | 308 (0.590) | coding (132/4617 nt) | lhr | putative ATP‑dependent helicase | |||||
Only 100 of 605 total aligned reads displayed.
GCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAC > CP009273/1723347‑1723479 | gagggcgtagagaaatgctgccagcgtttcccggagccggtcggtgcaatcaccagcgcatgttcgct > 1:37890410‑M1/67‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:35601840/1‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:41683646/1‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:23377433/1‑68 (MQ=255)gCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTttct > 1:5823860/1‑68 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:3635277‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:41464214‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:45480550‑M1/4‑1 (MQ=255) ggcgtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgcttc < 1:2187320‑M1/4‑1 (MQ=255) aTAATCCAGACCCTTCATCGCTCCTGCCGGCCGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTcgc > 1:9665910/1‑68 (MQ=255) aTAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTcgc > 1:49289848/1‑68 (MQ=255) gtagagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgCTTcgcg > 1:3878841‑M1/62‑68 (MQ=255) agagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgCTTCGCGcc > 1:42244510‑M1/60‑68 (MQ=255) aTCCAGACCCTTCATCGGTCCTGCCGGACGTGTTTTCACGGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:49921085/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:6608113/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:35002102/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:28998097/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:27880105/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:8642926/68‑1 (MQ=255) aTCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGcc < 1:15581999/68‑1 (MQ=255) tCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCt > 1:39339721/1‑68 (MQ=255) tCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCt > 1:49497413/1‑68 (MQ=255) tCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCt < 1:46076178/68‑1 (MQ=255) gagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgCTTCGCGcc < 1:5247123‑M1/9‑1 (MQ=255) gagaaatgctgccagcgttttcccggagccggtcggtgcaatcaccagcgcatgttcgCTTCGCGcc < 1:27201739‑M1/9‑1 (MQ=255) ccAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCtt > 1:28274580/1‑68 (MQ=255) ccAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCtt > 1:43901923/1‑68 (MQ=255) ccAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCtt > 1:18568734/1‑68 (MQ=255) cAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCttt > 1:13155565/1‑68 (MQ=255) cAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCttt < 1:10706266/68‑1 (MQ=255) cAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCttt < 1:18066993/68‑1 (MQ=255) cAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCttt < 1:14279768/68‑1 (MQ=255) aCCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTaa > 1:36017231/1‑67 (MQ=255) aCCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTaa > 1:7456969/1‑67 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTaaa > 1:6833301/1‑67 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:9341527/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:8921385/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:15976797/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:19894593/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:40088991/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:25161428/1‑68 (MQ=255) cccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAAc > 1:7725742/1‑68 (MQ=255) ccTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACa < 1:16667688/68‑1 (MQ=255) ttCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGc < 1:8372397/68‑1 (MQ=255) cATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCg > 1:4576283/1‑68 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:48783786/1‑67 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:10467699/1‑67 (MQ=255) tCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGa > 1:11966212/1‑67 (MQ=255) aatcTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTTAACAGGCGa > 1:32440780/4‑67 (MQ=255) cGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc < 1:24715550/68‑1 (MQ=255) cGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGAcc < 1:21189849/68‑1 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCt < 1:34485572/68‑1 (MQ=255) tCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCt < 1:24832343/68‑1 (MQ=255) cTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGt < 1:32033330/68‑1 (MQ=255) cTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGt < 1:40737890/68‑1 (MQ=255) ccGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:50943252/1‑68 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:34062977/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:18985231/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:36875425/1‑67 (MQ=255) cGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCa > 1:25782894/1‑67 (MQ=255) ggACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGc < 1:13898689/68‑1 (MQ=255) ggACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGc < 1:47008656/68‑1 (MQ=255) ggACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGc < 1:48560904/68‑1 (MQ=255) ggACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGc < 1:20571087/68‑1 (MQ=255) aCGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGcc < 1:21363046/67‑1 (MQ=255) cGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGc > 1:29532653/1‑68 (MQ=255) cGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGc > 1:15071556/1‑68 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:2746139/68‑1 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:31006945/68‑1 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:48224338/68‑1 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:33852421/68‑1 (MQ=255) gtTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCaaa < 1:2394617/68‑1 (MQ=255) tttCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAAcc < 1:23633871/68‑1 (MQ=255) cACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTgg < 1:32946514/68‑1 (MQ=255) cACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTgg < 1:11582071/68‑1 (MQ=255) aCCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGc > 1:37454855/1‑68 (MQ=255) ccGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCa > 1:7311692/1‑68 (MQ=255) ccGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCa > 1:42445287/1‑68 (MQ=255) cGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAt < 1:28709660/68‑1 (MQ=255) cGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAt < 1:47652719/68‑1 (MQ=255) cGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgt < 1:17364700/67‑1 (MQ=255) gACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCAtgtg > 1:14601087/1‑67 (MQ=255) cccGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTggc < 1:30053704/67‑1 (MQ=255) cccGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTggc < 1:30608198/67‑1 (MQ=255) agcgcatgttcgCTTCGCGCCGTTAAACAGCCGACCGCTGTCCCGCCGCAAACCTGGCATGTggcggc < 1:44807311‑M1/56‑1 (MQ=255) gcgACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGgcggcg < 1:26529177/68‑1 (MQ=255) gcatgttcgCTTCGCGCCTTTAAACAGCCGCCCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGcgcg < 1:50350652‑M1/59‑1 (MQ=255) gcatgttcgCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCACACCTGGCATGTGGCGGcgcg < 1:22997227‑M1/59‑1 (MQ=255) aCTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCACACCTGGCATGTGGCGGCgcga > 1:46525267/1‑68 (MQ=255) aCTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcga > 1:22423451/1‑68 (MQ=255) cTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaa < 1:41165524/68‑1 (MQ=255) cTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaa < 1:11269577/68‑1 (MQ=255) cTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaa < 1:13596478/68‑1 (MQ=255) ggTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagc < 1:42722195/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:10031588/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:12449615/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:43411343/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:31408101/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcga < 1:33424410/67‑1 (MQ=255) tgCTTCGCGCCTTTAAACAGCCGACCGCTGTCCCGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa > 1:4537342‑M1/3‑68 (MQ=255) | GCAGATAATCCAGACCCTTCATCGCTCCTGCCGGACGTGTTTTCACCGGCGACCCGCGACTGGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAC > CP009273/1723347‑1723479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |