| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1723413 = | 489 (0.790) | 22 (0.040) | 5/94 | NT | 5.8% | coding (70/4617 nt) | lhr | putative ATP‑dependent helicase |
| ? | CP009273 | 1723475 = | 308 (0.590) | coding (132/4617 nt) | lhr | putative ATP‑dependent helicase | |||||
Only 100 of 547 total aligned reads displayed.
GGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGCCCTC > CP009273/1723408‑1723541 | ttcgCTTCGCGCCTTTAAACAGCCGCCCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcg < 1:31238781‑M1/64‑1 (MQ=255) tttCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcga > 1:17482513/1‑68 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:10164857/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:42829184/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:12449615/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcgaa < 1:10031588/68‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcga < 1:22486110/67‑1 (MQ=255) ttcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCgcgaagcga < 1:2780968/67‑1 (MQ=255) cgcttcgcgccgccacatgccaggtttgcggctggacagcggtcggctgtttaaaggcgcgaagcgaa < 1:19104098‑M2/4‑1 (MQ=255) tcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAc > 1:10832470/1‑68 (MQ=255) tcttcGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAAc > 1:11724336/1‑68 (MQ=255) TCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACAt < 1:30469896‑M1/67‑1 (MQ=255) TCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACAt < 1:42374389‑M1/67‑1 (MQ=255) cgcgccgccacatgccaggtttgcggctggacagcggtcggctgtttaaaggcgcgaagCGAACATgc < 1:32090785‑M2/9‑1 (MQ=255) cgcgccgccacatgccaggtttgcggctggacagcggtcggctgtttaaaggcgcaaagCGAACATgc < 1:18749782‑M2/9‑1 (MQ=255) cgcgccgccacatgccaggtttgcggctggacagcgggcggctgtttaaaggcgcgaagCGAACATgc < 1:50350652‑M2/9‑1 (MQ=255) CGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATgc > 1:13468073‑M1/1‑68 (MQ=255) CGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATgc > 1:23556644‑M1/1‑68 (MQ=255) CGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATgc > 1:20602908‑M1/1‑68 (MQ=255) GCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATgcgc > 1:33196757‑M1/1‑67 (MQ=255) GCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATgcgc > 1:24819949‑M1/1‑67 (MQ=255) GCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCt > 1:43197214‑M1/1‑68 (MQ=255) GCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCt > 1:31533949‑M1/1‑68 (MQ=255) GCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCt > 1:47803271‑M1/1‑68 (MQ=255) CCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTg < 1:40542098‑M1/68‑1 (MQ=255) cgccacatgccaggttcgcggctggacagcggtcggctgtttaaaggcgcgaagCGAACATGCGCTgg < 1:704615‑M2/14‑1 (MQ=255) cgccacatcccaggtttgcggcgggacagcggtcggctgtttaaaggcgcgaagCGAACATGCGCTgg < 1:37114548‑M2/14‑1 (MQ=255) CTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTgg > 1:24634699‑M1/1‑68 (MQ=255) CTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTgg > 1:12109865‑M1/1‑68 (MQ=255) CTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTgg > 1:220149‑M1/1‑68 (MQ=255) ttAAACAGCCGACCGCTGTCCATCCTCAAACCTGTCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:21314588/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:19933144/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:5599103/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:7432567/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:35907540/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:38834831/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:3545924/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:19515375/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:34881972/68‑1 (MQ=255) ttAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTg < 1:33431307/68‑1 (MQ=255) cacatgccaggtttgcggctggacagcgggcggcggtttaaaggcgcgaagCGAACATGCGCTGGTg < 1:39266106‑M2/16‑1 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:38367309/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:15016281/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:791995/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:8179373/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:33822137/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:29964706/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:29314983/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:46964335/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:18086840/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:27559678/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:49378553/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:48301112/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGAtt > 1:23363759/1‑67 (MQ=255) aCAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTg < 1:20931577/68‑1 (MQ=255) aGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAACCGAACATGCGCTGGTGATTGc > 1:44175469/1‑67 (MQ=255) gCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCa > 1:12639303/1‑67 (MQ=255) gCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCa > 1:13826078/1‑67 (MQ=255) gACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCaccga < 1:21596837/68‑1 (MQ=255) gACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCaccga < 1:2890778/68‑1 (MQ=255) gACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCaccga < 1:15826132/68‑1 (MQ=255) gCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCaccgaccg > 1:25554280/1‑67 (MQ=255) gCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCaccgaccg > 1:25906099/1‑67 (MQ=255) gCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCgg < 1:35176887/68‑1 (MQ=255) tGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGc < 1:22270085/67‑1 (MQ=255) tGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGc < 1:26606272/67‑1 (MQ=255) tGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCt < 1:2302099/68‑1 (MQ=255) ccAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCg > 1:30206156/1‑68 (MQ=255) gCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGa > 1:1417090/1‑68 (MQ=255) cGCAAACCTGGCATGTGGCGGCGCGAAGCGAACTTGCGCTGGTGATTGCACCGACCGGCTCCGGGaaa > 1:43415862/1‑68 (MQ=255) cGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCggg < 1:22708228/65‑1 (MQ=255) cGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGaaa > 1:37926140/1‑68 (MQ=255) cGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGaaa > 1:8341131/1‑68 (MQ=255) aCCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAAc > 1:44477716/1‑65 (MQ=255) tGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGCCCGGCTCCGGGAAAACGCTGgc > 1:21107610/1‑68 (MQ=255) tGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgc > 1:41505361/1‑68 (MQ=255) ggCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgca < 1:28441381/68‑1 (MQ=255) cATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc > 1:1672886/1‑68 (MQ=255) cATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc > 1:16221810/1‑68 (MQ=255) cATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc > 1:49521587/1‑68 (MQ=255) aTGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc < 1:49923781/67‑1 (MQ=255) aTGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc < 1:41885919/67‑1 (MQ=255) aTGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc < 1:30918790/67‑1 (MQ=255) aTGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc < 1:31101322/67‑1 (MQ=255) aTGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGgcagc < 1:9557360/67‑1 (MQ=255) tgtgGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGCCCGGCTCCGGGAAAACGCTGGCAGCAt > 1:37601207/1‑68 (MQ=255) tgtgGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCAt > 1:646329/1‑68 (MQ=255) gtgGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCAtt < 1:38574096/68‑1 (MQ=255) ggcggcGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTtc < 1:23864022/68‑1 (MQ=255) ggcggcGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTtc < 1:45045685/68‑1 (MQ=255) cggcgCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTtct < 1:34272821/67‑1 (MQ=255) ggcgcgaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTtctc < 1:5247123‑M2/58‑1 (MQ=255) ggcgcgaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTtctc < 1:27201739‑M2/58‑1 (MQ=255) ggcgcgaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTctct > 1:9045742‑M2/10‑68 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGcc < 1:46067826‑M2/64‑1 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGcc < 1:45480550‑M2/64‑1 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGcc < 1:28110346‑M2/64‑1 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGcc < 1:36548761‑M2/64‑1 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGc < 1:40167840‑M2/63‑1 (MQ=255) gaagCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGc < 1:32663944‑M2/63‑1 (MQ=255) | GGTTTCTTCGCGCCTTTAAACAGCCGACCGCTGTCCAGCCGCAAACCTGGCATGTGGCGGCGCGAAGCGAACATGCGCTGGTGATTGCACCGACCGGCTCCGGGAAAACGCTGGCAGCATTTCTCTACGCCCTC > CP009273/1723408‑1723541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |