| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1793039 | 136 (0.380) | 10 (0.030) | 7/96 | NT | 8.1% | coding (161/984 nt) | pheS | phenylalanine tRNA synthetase, alpha subunit |
| ? | CP009273 | = 1793052 | 109 (0.350) | coding (148/984 nt) | pheS | phenylalanine tRNA synthetase, alpha subunit | |||||
CAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1792966‑1793039‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgccgCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGA < CP009273/1793052‑1792986 CAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCA > 1:20320141/1‑67 AGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGC < 1:24475011/68‑1 AGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCA > 1:19670514/1‑66 GTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCA > 1:1406210/1‑65 GTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCA > 1:13886769/1‑65 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGC < 1:20580028/68‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGC < 1:574039/68‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:17817925/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:10206733/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:20706573/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:21212172/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:22904215/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:23746427/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:25383521/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:28940322/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:4410204/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:602648/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:6351246/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:7409844/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:7776992/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:991882/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:10106970/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:10394803/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTG > 1:13235288/1‑67 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCT < 1:930292/66‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCT < 1:22390395/66‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGC < 1:27503288/65‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGC < 1:1146139/65‑1 TCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCATTCGCTTAGTTGATAACCGCACCAGCag > 1:16712210/1‑65 CGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCCGCTGCCGGCGGAAGCGCGGCCGGCA > 1:8437757/1‑68 CGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGGCGGCAGGAGGGGGTCCGGCg > 1:1570725/1‑67 CGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGAGCGTCCGGCA > 1:24166595/1‑68 CCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGCGCGTCCGGCCGCTGGTGCGGT > 1:17021254/1‑68 CCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGCGCGTCCGGCAGCGGGTGGGGT > 1:4459226/1‑68 CTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTT > 1:604788/1‑68 CTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGTGCGTCGGGCAGCGGGTGCGGGTATg > 1:6855176/1‑67 TTCGCTTCGTTGATAACCGCACCCGCTGCCGCGAGAAGGGCGTGCGGCCGCTGGTGCGGGTATCAAC > 1:12108495/1‑67 CGCTTCGTTGATAACCGCACCAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTTGCAACGAc > 1:24558449/1‑67 ACCGCACCAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGG > 1:12113539/1‑68 ACCAGCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCA > 1:12590113/1‑67 GCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAG > 1:24542706/1‑67 GCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAG > 1:5137215/1‑67 GCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAG > 1:26551003/1‑67 GCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAG > 1:19407394/1‑67 GCTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAG > 1:3896491/1‑67 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:16241498/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:5893779/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:15417928/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:10884566/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:29220555/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:20998055/1‑68 CTGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:24362088/1‑68 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCG < 1:21168945/68‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCG < 1:7304785/68‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCG < 1:27370136/68‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCG < 1:5290779/68‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC < 1:14302280/67‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC < 1:7873181/67‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGG < 1:14956638/66‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGG < 1:6460446/66‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGG < 1:26100390/66‑1 TGCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGG < 1:12818115/66‑1 TGCCGCCAGAAGAGCGGCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCG < 1:9158931/68‑1 TGCCGCCAGAAGAGCGGCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGG < 1:12998950/66‑1 GCCGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGC > 1:23019445/1‑66 CGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCCACGAAGCGAAAGAGCAGGGTCAGCAGGCGCT < 1:10851000/67‑1 CGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCT < 1:9542891/67‑1 CGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCT < 1:13945039/67‑1 CGCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCT < 1:10233053/67‑1 CGCCAGAAGAGCGTCCCGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCT < 1:21907897/67‑1 GCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGA < 1:830451/68‑1 GCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGA < 1:1136828/68‑1 GCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGA > 1:29794181/1‑68 CAGTTCCGCTTTACGCGCATTCAGCGCCTGCTGAACCTGCTCTTTCGCTTCGTTGATAACCGCACCAGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1792966‑1793039‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgccgCCAGAAGAGCGTCCGGCAGCTGGTGCGGTTATCAACGAAGCGAAAGAGCAGGTTCAGCAGGCGCTGA < CP009273/1793052‑1792986 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |