| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 1821389 | 211 (0.590) | 9 (0.030) | 7/94 | NT | 5.1% | coding (1128/1344 nt) | astB | succinylarginine dihydrolase |
| ? | CP009273 | = 1821423 | 160 (0.530) | coding (1094/1344 nt) | astB | succinylarginine dihydrolase | |||||
Only 100 of 120 total aligned reads displayed.
AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:8468122/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC < 1:16681386/67‑1AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:18276527/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:18644132/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:18917323/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:22235609/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:2267114/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:2487958/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:26165582/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:11219126/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:28812636/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:2959645/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGC > 1:3563475/1‑67AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCG < 1:25157491/66‑1AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCAGGATTCACCGC > 1:21405384/1‑67 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:26586201/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:26131231/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:22712908/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:1994148/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:4965055/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:5026327/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:6624231/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:18175888/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:17115958/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:10294365/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:10730527/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCG > 1:13023652/1‑68 CGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATAATCACCGCCGGATTCACCGCCCG > 1:2088964/1‑68 GATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGG < 1:28737023/68‑1 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:6642341/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:22676426/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:2092720/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:14155212/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:10493101/1‑68 ATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC > 1:4356862/1‑68 ATCCAACCAGTCATTGAGCGCATTAAAAAGCGTATCGTTCATCATCACAGACGGATACCCCGCCCGGC > 1:13761359/1‑68 TCCACCCAGTCTTTGCGGGGATTAAACAGCGTATCGTTCATCATCCCCGCCGGATTCACCGCCCGGC < 1:23326959/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:24075953/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:18057532/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:19885895/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:10956460/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCG > 1:15893844/1‑68 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:8304880/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:2293570/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:27581411/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:6280256/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:3188003/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:17400996/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:7087595/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:1044506/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:1542559/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGC < 1:14856910/67‑1 TCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGATCATCATCACCGCCGGATTCACCGCCCGGC < 1:5760731/67‑1 CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT < 1:23043141/68‑1 CCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT > 1:2910181/1‑68 CACCCAGTGATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT > 1:14236780/1‑67 ACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTG > 1:27308838/1‑67 CAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGAC > 1:14843643/1‑68 GTATCGTTCATCATCACCGCCGGCTTCACCGCCCGGCGTGGCTGCGGTTGGGGGGGGTTTTGGCAGta > 1:10999489/1‑66 GTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGTGCCTGCGGGTGGGGGTGGTTTTGACAGta > 1:13842774/1‑66 ACCGCCGGATTCACCGCCCGGCGTGCCTGCGGTTGGGGGTGGTTTTGACAGAAGAAGAACGCCGGGCG > 1:18005887/1‑68 CGGATTCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAA > 1:27962787/1‑68 TCACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACTGAAGAAGAACGCCGGGCGGTGAATCCG > 1:7505479/1‑67 CACCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGCAGAACGCCGGGCGGGGAAGCCGGC > 1:29164986/1‑68 CCGCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGG > 1:8224077/1‑68 GCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTG > 1:18700044/1‑68 GCCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTG > 1:28679476/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:7929630/1‑68 CCCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA > 1:12571801/1‑68 CCGGCGTGCCTGCTGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:8579036/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:10652337/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:3840456/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:444689/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:8093794/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:10493109/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:7267728/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:16611079/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT > 1:3088686/1‑68 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:23504274/68‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:28142121/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:16870953/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:15623239/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:13176867/67‑1 CCGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:22165668/67‑1 CCGGCGTGCCTGCGGGTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:2817619/68‑1 CCGGCGTGCCGGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGA < 1:22020716/67‑1 CCGGCGTGCCGGCGGTTGCGGGTGGTATTGACACAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGAT < 1:10285522/68‑1 CGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATG < 1:3014812/68‑1 CGGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATG < 1:21725811/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:2101626/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:25103331/68‑1 GGCGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGA < 1:12777340/68‑1 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:22487927/1‑68 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:5690973/1‑68 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATG > 1:14132506/1‑68 CGTGCCTGCGGTTGCGGGTGGTATTGACAGAACAAGAACGCCGGGCGGTGAATCCGCCGGTGATGAat > 1:8955164/1‑66 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA > 1:12175699/1‑68 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:2466852/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:20519380/68‑1 GTGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < 1:16625957/68‑1 AACGATCCACCCAGTCATTGAGCGCATTAAACAGCGTATCGTTCATCATCACCGCCGGATTCACCGCCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/1821316‑1821389‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccggcgtGCCTGCGGTTGCGGGTGGTATTGACAGAAGAAGAACGCCGGGCGGTGAATCCGGCGGTGATGATGA < CP009273/1821423‑1821358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |